EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

EnhancerAtlas 2.0 integrated enhancers from 12 high-throupghput technologies including P300, Histone, POLR2A, TF-binding, DHS, FAIRE, Mnase-seq, GRO-seq, STARR-seq, CAGE, CHIA-PET, and MPRA. Users could click any enhancer to view its detailed information.


HCC1954 | Homo sapiens

Cell type: Epithelial cell | Tissue: Mammary gland; breast/duct | Disease: TNM stage IIA, grade 3, ductal carcinoma.

Tissue/cell description report link(s): >>ExPASy and >>ATCC.

The tissue/cell type 'HCC1954' in Homo sapiens contains 2972 enhancers. Of these enhancers, 166 are associated with 221 SNPs. SNPs Enhancers

Show: chr20>>chr1>>chr2>>chr3>>chr4>>chr5>>chr6>>chr7>>chr8>>chr9>>chr10>>chr11>>chr12>>chr13>>chr14>>chr15>>chr16>>chr17>>chr18>>chr19>>chr20>>chr21>>chr22>>chrX>>chrY>>All


ID Coordinate SNPs TF binding sites Other Evidence
HS083-01507chr20:442840-44297000--
HS083-01508chr20:835980-83809004GeneHancer;HEDD
HS083-01509chr20:1373270-137347000dbSUPER
HS083-01510chr20:1396450-139755004GeneHancer;dbSUPER;HEDD
HS083-01511chr20:1459250-146034002GeneHancer;dbSUPER
HS083-01512chr20:1549930-155040002GeneHancer
HS083-01513chr20:2082820-208341001dbSUPER
HS083-01514chr20:2113400-211438000GeneHancer;dbSUPER
HS083-01515chr20:2733190-273328002--
HS083-01516chr20:3027380-302770000--
HS083-01517chr20:3792390-379281001dbSUPER
HS083-01518chr20:3801500-380196000dbSUPER
HS083-01519chr20:3827550-382800000dbSUPER
HS083-01520chr20:4667380-466748000--
HS083-01521chr20:5344100-534614004--
HS083-01522chr20:6102830-610342003--
HS083-01523chr20:6203210-620344000--
HS083-01524chr20:6687000-668977003GeneHancer;dbSUPER;HEDD
HS083-01525chr20:10571080-1057932003GeneHancer;dbSUPER
HS083-01526chr20:13914900-1391522000--
HS083-01527chr20:14842520-1484334001--
HS083-01528chr20:23338160-2333859002dbSUPER
HS083-01529chr20:25603800-2560449001dbSUPER
HS083-01530chr20:25855450-2585580000--
HS083-01531chr20:29498120-2949833000--
HS083-01532chr20:30160730-3016094001dbSUPER
HS083-01533chr20:30180890-3018308004GeneHancer;dbSUPER;HEDD
HS083-01534chr20:32699710-3269990000dbSUPER
HS083-01535chr20:32951160-3295128000--
HS083-01536chr20:33104270-3310454010dbSUPER
HS083-01537chr20:33932130-3393277001GeneHancer;dbSUPER
HS083-01538chr20:34129940-3413007001--
HS083-01539chr20:34680740-3468182000dbSUPER
HS083-01540chr20:36751650-3675285002GeneHancer;dbSUPER
HS083-01541chr20:38370810-3837103002--
HS083-01542chr20:38503920-3850414000--
HS083-01543chr20:40476560-4047678001--
HS083-01544chr20:42086780-4208700000--
HS083-01545chr20:42567450-4256911001GeneHancer;dbSUPER
HS083-01546chr20:42762510-4276360000GeneHancer;dbSUPER
HS083-01547chr20:43104630-4310476008--
HS083-01548chr20:43588420-4358884000dbSUPER
HS083-01549chr20:43965160-4396906005dbSUPER;HEDD
HS083-01550chr20:43991960-4399216005--
HS083-01551chr20:44563440-4456421000dbSUPER
HS083-01552chr20:45591190-4559389003GeneHancer;dbSUPER
HS083-01553chr20:46081280-46085640018GeneHancer;dbSUPER
HS083-01554chr20:46188430-4618863000dbSUPER
HS083-01555chr20:47538550-4753926001dbSUPER
HS083-01556chr20:47804320-4780465002--
HS083-01557chr20:48199750-4820190011GeneHancer;dbSUPER
HS083-01558chr20:48680820-4868112000--
HS083-01559chr20:48859050-4886448009GeneHancer;dbSUPER
HS083-01560chr20:48914950-4891616004GeneHancer;dbSUPER
HS083-01561chr20:48936780-4893761000GeneHancer;dbSUPER
HS083-01562chr20:48947870-4895189002GeneHancer;dbSUPER
HS083-01563chr20:49031610-4903324002GeneHancer;dbSUPER
HS083-01564chr20:49099940-4910156009GeneHancer;dbSUPER;HEDD
HS083-01565chr20:49262030-4926223000GeneHancer;dbSUPER
HS083-01566chr20:49262420-4926302000GeneHancer;dbSUPER
HS083-01567chr20:49377380-4938139003GeneHancer;dbSUPER;HEDD
HS083-01568chr20:50383260-5038404008dbSUPER;HEDD
HS083-01569chr20:51820610-5182089000--
HS083-01570chr20:52351540-5235777009GeneHancer;dbSUPER
HS083-01571chr20:52594640-5259485000--
HS083-01572chr20:54143510-5414372000--
HS083-01573chr20:54188230-5418844000--
HS083-01574chr20:54934250-5493566001dbSUPER;HEDD
HS083-01575chr20:55180990-5518260000GeneHancer;HEDD
HS083-01576chr20:55379200-5538071002GeneHancer;dbSUPER;HEDD
HS083-01577chr20:55382830-5538608003GeneHancer;dbSUPER
HS083-01578chr20:56261890-5626401000GeneHancer;dbSUPER
HS083-01579chr20:56270680-5627497005GeneHancer;dbSUPER;HEDD
HS083-01580chr20:56283230-5628452000dbSUPER
HS083-01581chr20:56322760-5632438023GeneHancer
HS083-01582chr20:56347160-5634844002GeneHancer;dbSUPER
HS083-01583chr20:56565500-5656856001GeneHancer;dbSUPER
HS083-01584chr20:56591890-5659359008GeneHancer;dbSUPER;HEDD
HS083-01585chr20:56686160-5668887004GeneHancer;dbSUPER
HS083-01586chr20:56964570-5696512001--
HS083-01587chr20:57185690-5718723009GeneHancer
HS083-01588chr20:57556420-5755739002--
HS083-01589chr20:57580890-5758137000dbSUPER;HEDD
HS083-01590chr20:57607000-5760727000--
HS083-01591chr20:57617280-5761775002dbSUPER
HS083-01592chr20:59760720-5976298001GeneHancer;dbSUPER
HS083-01593chr20:60054480-6005469000--
HS083-01594chr20:60697850-6069832000--
HS083-01595chr20:60941090-6094200002dbSUPER;HEDD
HS083-01596chr20:62257650-6225830004dbSUPER
HS083-01597chr20:62312880-6231495005GeneHancer;dbSUPER;HEDD
HS083-01598chr20:62526680-6252698001dbSUPER