EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

EnhancerAtlas 2.0 integrated enhancers from 12 high-throupghput technologies including P300, Histone, POLR2A, TF-binding, DHS, FAIRE, Mnase-seq, GRO-seq, STARR-seq, CAGE, CHIA-PET, and MPRA. Users could click any enhancer to view its detailed information.


HCC1954 | Homo sapiens

Cell type: Epithelial cell | Tissue: Mammary gland; breast/duct | Disease: TNM stage IIA, grade 3, ductal carcinoma.

Tissue/cell description report link(s): >>ExPASy and >>ATCC.

The tissue/cell type 'HCC1954' in Homo sapiens contains 2972 enhancers. Of these enhancers, 166 are associated with 221 SNPs. SNPs Enhancers

Show: chr13>>chr1>>chr2>>chr3>>chr4>>chr5>>chr6>>chr7>>chr8>>chr9>>chr10>>chr11>>chr12>>chr13>>chr14>>chr15>>chr16>>chr17>>chr18>>chr19>>chr20>>chr21>>chr22>>chrX>>chrY>>All


ID Coordinate SNPs TF binding sites Other Evidence
HS083-00627chr13:19656600-1965682000--
HS083-00628chr13:19939600-1993981000--
HS083-00629chr13:20437380-2043758000dbSUPER
HS083-00630chr13:21347630-2134799000--
HS083-00631chr13:25084970-2508684002--
HS083-00632chr13:28023570-2802420001dbSUPER
HS083-00633chr13:28642690-2864290000GeneHancer
HS083-00634chr13:29949570-2994988001--
HS083-00635chr13:30169050-3016955000--
HS083-00636chr13:31403110-3140883007GeneHancer;dbSUPER;HEDD
HS083-00637chr13:31523270-3152348000--
HS083-00638chr13:35315620-3531595000--
HS083-00639chr13:36629930-3663014000--
HS083-00640chr13:38336250-3833648000--
HS083-00641chr13:40788260-4078894011dbSUPER
HS083-00642chr13:42614260-4261510004dbSUPER
HS083-00643chr13:42623100-4262379003--
HS083-00644chr13:45694860-4569536000--
HS083-00645chr13:50656690-5065727002dbSUPER
HS083-00646chr13:56403580-5640380000--
HS083-00647chr13:58670960-5867118000--
HS083-00648chr13:62407800-6240802001--
HS083-00649chr13:63770180-6377039002--
HS083-00650chr13:73782780-7378352000dbSUPER
HS083-00651chr13:79233030-7923318001--
HS083-00652chr13:83243550-8324377000--
HS083-00653chr13:88414840-8841508000--
HS083-00654chr13:89945650-8994588000--
HS083-00655chr13:93454780-9345502000--
HS083-00656chr13:93531220-9353144000--
HS083-00657chr13:96329590-9632985000--
HS083-00658chr13:103425570-10342603000--
HS083-00659chr13:109675550-10967590000--
HS083-00660chr13:111476310-11147651003--
HS083-00661chr13:111566560-11156707000dbSUPER
HS083-00662chr13:112533610-11253382000--
HS083-00663chr13:114829020-11483157006GeneHancer;dbSUPER
HS083-00664chr13:115047600-11504790000dbSUPER
HS083-00665chr13:115080120-11508040001dbSUPER