EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

EnhancerAtlas 2.0 integrated enhancers from 12 high-throupghput technologies including P300, Histone, POLR2A, TF-binding, DHS, FAIRE, Mnase-seq, GRO-seq, STARR-seq, CAGE, CHIA-PET, and MPRA. Users could click any enhancer to view its detailed information.


HCC1954 | Homo sapiens

Cell type: Epithelial cell | Tissue: Mammary gland; breast/duct | Disease: TNM stage IIA, grade 3, ductal carcinoma.

Tissue/cell description report link(s): >>ExPASy and >>ATCC.

The tissue/cell type 'HCC1954' in Homo sapiens contains 2972 enhancers. Of these enhancers, 166 are associated with 221 SNPs. SNPs Enhancers

Show: chr10>>chr1>>chr2>>chr3>>chr4>>chr5>>chr6>>chr7>>chr8>>chr9>>chr10>>chr11>>chr12>>chr13>>chr14>>chr15>>chr16>>chr17>>chr18>>chr19>>chr20>>chr21>>chr22>>chrX>>chrY>>All


ID Coordinate SNPs TF binding sites Other Evidence
HS083-00300chr10:1094320-109480000dbSUPER
HS083-00301chr10:3214710-321490000--
HS083-00302chr10:4704610-470542001GeneHancer;dbSUPER
HS083-00303chr10:5529880-553176002GeneHancer;dbSUPER;HEDD
HS083-00304chr10:5586700-5595110012GeneHancer;dbSUPER;HEDD
HS083-00305chr10:5625240-562697007GeneHancer;dbSUPER
HS083-00306chr10:5651500-5653140024GeneHancer;dbSUPER;HEDD
HS083-00307chr10:6337470-634259004GeneHancer;dbSUPER;HEDD
HS083-00308chr10:7502150-750236000dbSUPER
HS083-00309chr10:8404410-840518000--
HS083-00310chr10:8407580-840900012GeneHancer;dbSUPER
HS083-00311chr10:11916690-1191867001GeneHancer;dbSUPER
HS083-00312chr10:11923260-1192511001GeneHancer;dbSUPER
HS083-00313chr10:12171790-1217211000--
HS083-00314chr10:15001560-1500250000--
HS083-00315chr10:16859080-1685931000--
HS083-00316chr10:19352490-1935269000--
HS083-00317chr10:22952860-2295326000dbSUPER
HS083-00318chr10:26477940-2647815000--
HS083-00319chr10:27149440-2714967000dbSUPER
HS083-00320chr10:27388930-2738901000--
HS083-00321chr10:27769020-2776932000--
HS083-00322chr10:27793370-2779380000--
HS083-00323chr10:30711870-3071294000GeneHancer;dbSUPER
HS083-00324chr10:30723310-3072418003dbSUPER
HS083-00325chr10:31976080-3197653000--
HS083-00326chr10:33562050-3356332001GeneHancer;dbSUPER;HEDD
HS083-00327chr10:38299710-3830078002--
HS083-00328chr10:42354890-4239744016GeneHancer
HS083-00329chr10:42527090-42546650044--
HS083-00330chr10:42596560-4260073001GeneHancer;dbSUPER
HS083-00331chr10:43133050-4313392003dbSUPER
HS083-00332chr10:43902530-4390316000dbSUPER
HS083-00333chr10:47055570-4705932006GeneHancer;dbSUPER
HS083-00334chr10:50746600-5074700000--
HS083-00335chr10:55631510-5563181000--
HS083-00336chr10:56495000-5649522000--
HS083-00337chr10:58120750-5812095000--
HS083-00338chr10:63292800-6329301000--
HS083-00339chr10:64028080-6402830000--
HS083-00340chr10:65281340-6528208000--
HS083-00341chr10:65594800-6559512000--
HS083-00342chr10:69486000-6948641000--
HS083-00343chr10:69819180-6981981000--
HS083-00344chr10:70091970-7009208001dbSUPER
HS083-00345chr10:70231000-7023154003--
HS083-00346chr10:71444200-7144683004GeneHancer;dbSUPER
HS083-00347chr10:71562470-7156282000--
HS083-00348chr10:74079310-7408069005GeneHancer;dbSUPER;HEDD
HS083-00349chr10:74114210-7411452001dbSUPER
HS083-00350chr10:75172600-7517376000--
HS083-00351chr10:78286410-7828661000--
HS083-00352chr10:79657680-7965910002GeneHancer;dbSUPER
HS083-00353chr10:93683850-9368397000--
HS083-00354chr10:94333540-9433367000--
HS083-00355chr10:95240450-9524186000dbSUPER
HS083-00356chr10:97094000-9709505001GeneHancer;dbSUPER
HS083-00357chr10:97667820-9766808000--
HS083-00358chr10:97878300-9787920000GeneHancer
HS083-00359chr10:98575980-9857651000--
HS083-00360chr10:99478040-9947904000GeneHancer;dbSUPER
HS083-00361chr10:102133770-10213508001dbSUPER
HS083-00362chr10:104614180-10461440000--
HS083-00363chr10:105677420-10567785001dbSUPER
HS083-00364chr10:107001930-10700280001--
HS083-00365chr10:112215650-11221758000GeneHancer;dbSUPER
HS083-00366chr10:118763630-11876453000dbSUPER
HS083-00367chr10:120718880-12072039002GeneHancer
HS083-00368chr10:120937680-12093826001--
HS083-00369chr10:122173990-12217421000--
HS083-00370chr10:122492720-12249367000--
HS083-00371chr10:124914000-12491443000--
HS083-00372chr10:126541730-12654194000--
HS083-00373chr10:128253350-12825390000dbSUPER
HS083-00374chr10:132779690-13278071000--
HS083-00375chr10:133371100-13337130000--
HS083-00376chr10:134220950-13422214012dbSUPER;HEDD
HS083-00377chr10:134261830-13426280003GeneHancer;dbSUPER;HEDD