EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

EnhancerAtlas 2.0 integrated enhancers from 12 high-throupghput technologies including P300, Histone, POLR2A, TF-binding, DHS, FAIRE, Mnase-seq, GRO-seq, STARR-seq, CAGE, CHIA-PET, and MPRA. Users could click any enhancer to view its detailed information.


HCC1954 | Homo sapiens

Cell type: Epithelial cell | Tissue: Mammary gland; breast/duct | Disease: TNM stage IIA, grade 3, ductal carcinoma.

Tissue/cell description report link(s): >>ExPASy and >>ATCC.

The tissue/cell type 'HCC1954' in Homo sapiens contains 2972 enhancers. Of these enhancers, 166 are associated with 221 SNPs. SNPs Enhancers

Show: chr19>>chr1>>chr2>>chr3>>chr4>>chr5>>chr6>>chr7>>chr8>>chr9>>chr10>>chr11>>chr12>>chr13>>chr14>>chr15>>chr16>>chr17>>chr18>>chr19>>chr20>>chr21>>chr22>>chrX>>chrY>>All


ID Coordinate SNPs TF binding sites Other Evidence
HS083-01185chr19:182820-18336000--
HS083-01186chr19:289800-29095001dbSUPER;HEDD
HS083-01187chr19:797510-79822003dbSUPER
HS083-01188chr19:1027800-102905004dbSUPER;HEDD
HS083-01189chr19:1269410-126982007dbSUPER
HS083-01190chr19:1383940-138401000dbSUPER
HS083-01191chr19:1591710-159252001dbSUPER
HS083-01192chr19:1905440-190614000--
HS083-01193chr19:2061240-206191007dbSUPER;HEDD
HS083-01194chr19:2164260-216437002dbSUPER
HS083-01195chr19:2427040-242725000--
HS083-01196chr19:2427320-242741000--
HS083-01197chr19:2491250-249193000GeneHancer;dbSUPER
HS083-01198chr19:2888570-288947001GeneHancer
HS083-01199chr19:3970670-397091010dbSUPER
HS083-01200chr19:5790400-579105001--
HS083-01201chr19:5828340-582854000GeneHancer;dbSUPER
HS083-01202chr19:6239360-623992001GeneHancer;dbSUPER
HS083-01203chr19:6765420-676739002dbSUPER
HS083-01204chr19:6828720-682882000GeneHancer
HS083-01205chr19:7098600-709974001GeneHancer
HS083-01206chr19:7566290-756641000--
HS083-01207chr19:8510000-851068002--
HS083-01208chr19:8578260-857892003dbSUPER
HS083-01209chr19:9141930-914254000--
HS083-01210chr19:10207250-1020732002dbSUPER
HS083-01211chr19:10304560-10305490020--
HS083-01212chr19:10426170-1042638000--
HS083-01213chr19:10612220-1061337000dbSUPER
HS083-01214chr19:10676280-1067639000dbSUPER
HS083-01215chr19:10713240-1071584003dbSUPER;HEDD
HS083-01216chr19:10857620-1086142011GeneHancer;dbSUPER;HEDD
HS083-01217chr19:11428250-1142855000GeneHancer
HS083-01218chr19:11466250-1146650000--
HS083-01219chr19:12036090-1203638000--
HS083-01220chr19:12904130-1290542012dbSUPER
HS083-01221chr19:13029890-1303005000--
HS083-01222chr19:13056840-1305758001dbSUPER
HS083-01223chr19:13273150-1327724008GeneHancer;dbSUPER;HEDD
HS083-01224chr19:13278020-1327938001GeneHancer;dbSUPER;HEDD
HS083-01225chr19:13840440-13842920010HEDD
HS083-01226chr19:14191820-1419244005GeneHancer;dbSUPER
HS083-01227chr19:14529570-1453008002dbSUPER
HS083-01228chr19:14616960-1461980022GeneHancer;dbSUPER;HEDD
HS083-01229chr19:14640520-1464106000--
HS083-01230chr19:14682470-1468270001--
HS083-01231chr19:15306750-1530736002dbSUPER
HS083-01232chr19:15947130-1594863001dbSUPER;HEDD
HS083-01233chr19:16222840-1622306000dbSUPER
HS083-01234chr19:16653060-1665316003--
HS083-01235chr19:18155520-1815690015GeneHancer;dbSUPER
HS083-01236chr19:18530520-1853059002dbSUPER
HS083-01237chr19:18747950-1874805000dbSUPER
HS083-01238chr19:18874150-1887583001GeneHancer;dbSUPER;HEDD
HS083-01239chr19:19496950-1949712000dbSUPER
HS083-01240chr19:21511610-2151201000--
HS083-01241chr19:27731660-27740740018GeneHancer
HS083-01242chr19:30097230-3009741000dbSUPER
HS083-01243chr19:30433570-3043382000--
HS083-01244chr19:33072230-3307270010--
HS083-01245chr19:33531290-3353372018GeneHancer;dbSUPER;HEDD
HS083-01246chr19:33537430-3354093007GeneHancer;dbSUPER;HEDD
HS083-01247chr19:34287890-3428866000dbSUPER
HS083-01248chr19:34625190-3462582001GeneHancer
HS083-01249chr19:34895720-3489583000--
HS083-01250chr19:34895900-3489599000--
HS083-01251chr19:34919480-3491983000--
HS083-01252chr19:35491390-3549152000dbSUPER
HS083-01253chr19:35607260-3560816002dbSUPER
HS083-01254chr19:35615230-3561541000GeneHancer;dbSUPER
HS083-01255chr19:35704160-3570545002GeneHancer;dbSUPER;HEDD
HS083-01256chr19:35740040-3574027000dbSUPER
HS083-01257chr19:36631060-3663189001dbSUPER
HS083-01258chr19:36683430-3668363000--
HS083-01259chr19:37157300-3715759001--
HS083-01260chr19:37862130-3786256000--
HS083-01261chr19:38145780-3814600002--
HS083-01262chr19:38421700-3842460005GeneHancer;dbSUPER;HEDD
HS083-01263chr19:38470210-3847284000GeneHancer;dbSUPER;HEDD
HS083-01264chr19:38755640-3875702004dbSUPER
HS083-01265chr19:39164050-3916440000dbSUPER
HS083-01266chr19:39321810-3932194000dbSUPER
HS083-01267chr19:39322160-3932236001dbSUPER
HS083-01268chr19:39327500-3932802000GeneHancer;dbSUPER
HS083-01269chr19:39328290-3932903000GeneHancer;dbSUPER
HS083-01270chr19:39339320-3934033003dbSUPER
HS083-01271chr19:39650480-3965257003GeneHancer;dbSUPER;HEDD
HS083-01272chr19:39926350-3992648001dbSUPER
HS083-01273chr19:40956170-4095638001--
HS083-01274chr19:41110600-4111094001dbSUPER
HS083-01275chr19:41111740-4111213000dbSUPER
HS083-01276chr19:41284300-4128477007dbSUPER
HS083-01277chr19:41770700-4177147010dbSUPER
HS083-01278chr19:41816260-4181694001dbSUPER
HS083-01279chr19:42302730-4230400015GeneHancer;dbSUPER;HEDD
HS083-01280chr19:42580440-4258076003--
HS083-01281chr19:42710480-4271293013GeneHancer;dbSUPER;HEDD
HS083-01282chr19:43685060-4368839012HEDD
HS083-01283chr19:43705720-4370758000HEDD
HS083-01284chr19:43967920-43968450012dbSUPER
HS083-01285chr19:44037670-4403794000dbSUPER
HS083-01286chr19:44123460-4412370001--
HS083-01287chr19:44258130-4425880005dbSUPER
HS083-01288chr19:45147480-4514813011dbSUPER
HS083-01289chr19:45148180-4514862000dbSUPER
HS083-01290chr19:45458720-4545913000--
HS083-01291chr19:45542370-4554277007dbSUPER
HS083-01292chr19:45616080-4561773001GeneHancer;dbSUPER;HEDD
HS083-01293chr19:45705390-4570659001--
HS083-01294chr19:45953360-45955240010dbSUPER;HEDD
HS083-01295chr19:46087140-4608788001dbSUPER
HS083-01296chr19:46117230-4611786002GeneHancer;dbSUPER
HS083-01297chr19:47364250-4736461006GeneHancer;dbSUPER
HS083-01298chr19:47427240-4743146009GeneHancer;dbSUPER;HEDD
HS083-01299chr19:47654770-4765615002GeneHancer;dbSUPER
HS083-01300chr19:48017930-4801809000dbSUPER
HS083-01301chr19:48084570-48086530091GeneHancer;dbSUPER
HS083-01302chr19:48150390-4815253005GeneHancer;dbSUPER;HEDD
HS083-01303chr19:48229480-48230290053GeneHancer;dbSUPER
HS083-01304chr19:48231950-48233760010dbSUPER
HS083-01305chr19:48249040-4824922000dbSUPER
HS083-01306chr19:48282070-4828291001dbSUPER
HS083-01307chr19:48706650-4870780003--
HS083-01308chr19:48972780-4897312000dbSUPER
HS083-01309chr19:48990310-4899255002GeneHancer;dbSUPER
HS083-01310chr19:48995880-48996950017GeneHancer;dbSUPER
HS083-01311chr19:49004660-4900473000GeneHancer;dbSUPER
HS083-01312chr19:49004820-49005680023GeneHancer;dbSUPER
HS083-01313chr19:49071360-4907225001GeneHancer;dbSUPER;HEDD
HS083-01314chr19:49217820-4921806001dbSUPER
HS083-01315chr19:49588890-4958913000--
HS083-01316chr19:49631370-4963162008dbSUPER
HS083-01317chr19:49758150-4975835002--
HS083-01318chr19:50828710-5082937007GeneHancer;dbSUPER;HEDD
HS083-01319chr19:51162000-5116220000--
HS083-01320chr19:51868670-5186952000dbSUPER
HS083-01321chr19:52693430-5269384001dbSUPER
HS083-01322chr19:52772880-5277372000--
HS083-01323chr19:54704760-5470502003dbSUPER
HS083-01324chr19:54705150-5470535001dbSUPER
HS083-01325chr19:54960490-5496103013dbSUPER
HS083-01326chr19:55677790-5567787000--
HS083-01327chr19:56135560-5613584005dbSUPER
HS083-01328chr19:56166520-5616702002dbSUPER
HS083-01329chr19:56602380-5660423008GeneHancer;dbSUPER
HS083-01330chr19:56825430-56826920011dbSUPER
HS083-01331chr19:58816340-5881714009--
HS083-01332chr19:58873570-5887404002--
HS083-01333chr19:58963070-5896348001--