EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

EnhancerAtlas 2.0 integrated enhancers from 12 high-throupghput technologies including P300, Histone, POLR2A, TF-binding, DHS, FAIRE, Mnase-seq, GRO-seq, STARR-seq, CAGE, CHIA-PET, and MPRA. Users could click any enhancer to view its detailed information.


HCC1954 | Homo sapiens

Cell type: Epithelial cell | Tissue: Mammary gland; breast/duct | Disease: TNM stage IIA, grade 3, ductal carcinoma.

Tissue/cell description report link(s): >>ExPASy and >>ATCC.

The tissue/cell type 'HCC1954' in Homo sapiens contains 2972 enhancers. Of these enhancers, 166 are associated with 221 SNPs. SNPs Enhancers

Show: chr4>>chr1>>chr2>>chr3>>chr4>>chr5>>chr6>>chr7>>chr8>>chr9>>chr10>>chr11>>chr12>>chr13>>chr14>>chr15>>chr16>>chr17>>chr18>>chr19>>chr20>>chr21>>chr22>>chrX>>chrY>>All


ID Coordinate SNPs TF binding sites Other Evidence
HS083-01894chr4:699760-69984000dbSUPER
HS083-01895chr4:1322880-132488002GeneHancer;dbSUPER
HS083-01896chr4:2797430-279898011dbSUPER;HEDD
HS083-01897chr4:3294250-329521009dbSUPER
HS083-01898chr4:3748020-374870000GeneHancer
HS083-01899chr4:3956300-395705000--
HS083-01900chr4:6748520-675031002GeneHancer;dbSUPER;HEDD
HS083-01901chr4:7807520-780854001GeneHancer;dbSUPER
HS083-01902chr4:8760490-876128002--
HS083-01903chr4:12649990-1265046000--
HS083-01904chr4:12668140-1266877000--
HS083-01905chr4:12715560-1271586002--
HS083-01906chr4:14838170-1483912000--
HS083-01907chr4:14924530-1492552001--
HS083-01908chr4:15399800-1540082001GeneHancer;dbSUPER
HS083-01909chr4:15655700-1565682010dbSUPER;HEDD
HS083-01910chr4:15683520-1568465001dbSUPER;HEDD
HS083-01911chr4:17261100-1726132000--
HS083-01912chr4:17616440-1761656000--
HS083-01913chr4:20072370-2007258002--
HS083-01914chr4:20473820-2047431000--
HS083-01915chr4:24585850-2458594000--
HS083-01916chr4:25916040-2591643001--
HS083-01917chr4:28058820-2805907000--
HS083-01918chr4:31818010-3181838000--
HS083-01919chr4:32938800-3293901000--
HS083-01920chr4:33458210-3345844000--
HS083-01921chr4:35996230-3599643000--
HS083-01922chr4:39638950-3964035000dbSUPER
HS083-01923chr4:39700010-3970022000--
HS083-01924chr4:41362950-4136443000dbSUPER
HS083-01925chr4:41541150-4154224005dbSUPER
HS083-01926chr4:43452810-4345367007--
HS083-01927chr4:43576890-4357710000--
HS083-01928chr4:47125340-4712606000--
HS083-01929chr4:48736710-4873692000--
HS083-01930chr4:48945800-4894622000GeneHancer;dbSUPER
HS083-01931chr4:49093120-4914542004GeneHancer
HS083-01932chr4:49145490-4915870000GeneHancer
HS083-01933chr4:49633270-4963784000--
HS083-01934chr4:49638530-4965148000GeneHancer
HS083-01935chr4:49651620-4966021001--
HS083-01936chr4:53688660-5369101007GeneHancer;dbSUPER;HEDD
HS083-01937chr4:59628290-5962889000--
HS083-01938chr4:59722290-5972250000--
HS083-01939chr4:67124010-6712422000--
HS083-01940chr4:68410850-6841105000dbSUPER
HS083-01941chr4:69495910-6949674001GeneHancer
HS083-01942chr4:70696170-7069755000GeneHancer;dbSUPER
HS083-01943chr4:71571120-7157255005--
HS083-01944chr4:71593190-7159350001--
HS083-01945chr4:71704510-7170494000--
HS083-01946chr4:71859640-7185986010dbSUPER
HS083-01947chr4:73321850-7332215000--
HS083-01948chr4:73933870-7393503001dbSUPER
HS083-01949chr4:74485690-7448600001dbSUPER
HS083-01950chr4:74540080-7454397001GeneHancer;dbSUPER
HS083-01951chr4:74591270-74594310035GeneHancer;dbSUPER;HEDD
HS083-01952chr4:75590440-7559135006GeneHancer;dbSUPER
HS083-01953chr4:76412580-7641311000--
HS083-01954chr4:76650070-7665054002dbSUPER
HS083-01955chr4:79473010-7947364001dbSUPER
HS083-01956chr4:82230920-8223113000--
HS083-01957chr4:83811370-8381224002dbSUPER
HS083-01958chr4:85504670-8550577000--
HS083-01959chr4:88580690-8858197001GeneHancer
HS083-01960chr4:89300410-8930164000--
HS083-01961chr4:92037230-9203746000--
HS083-01962chr4:94143940-9414416000--
HS083-01963chr4:98203460-9820368001--
HS083-01964chr4:101566720-10156711000--
HS083-01965chr4:106394030-10639505000--
HS083-01966chr4:107821230-10782145000--
HS083-01967chr4:114524510-11452473001dbSUPER
HS083-01968chr4:120987240-12098781000--
HS083-01969chr4:122617770-12261801000dbSUPER
HS083-01970chr4:125858840-12586001001GeneHancer;HEDD
HS083-01971chr4:133485360-13348558000--
HS083-01972chr4:135928880-13592924000--
HS083-01973chr4:137490790-13749101000--
HS083-01974chr4:138764250-13876447000--
HS083-01975chr4:140098720-14009973003dbSUPER
HS083-01976chr4:140375600-14037574000--
HS083-01977chr4:148705630-14870619001dbSUPER
HS083-01978chr4:150464580-15046478000--
HS083-01979chr4:151166870-15116709000--
HS083-01980chr4:151410260-15141082000--
HS083-01981chr4:152030740-15203095000--
HS083-01982chr4:152330620-15233079000--
HS083-01983chr4:154215980-15421646001GeneHancer
HS083-01984chr4:154498000-15449856001dbSUPER
HS083-01985chr4:158744200-15874653003GeneHancer
HS083-01986chr4:159027560-15902807000--
HS083-01987chr4:166462350-16646278000--
HS083-01988chr4:169497960-16949818000--
HS083-01989chr4:170046040-17004714000GeneHancer;dbSUPER
HS083-01990chr4:170947180-17094738000dbSUPER
HS083-01991chr4:174090110-17409059000dbSUPER
HS083-01992chr4:174405090-17440579000--
HS083-01993chr4:175443220-17544350000--
HS083-01994chr4:175460130-17546099000GeneHancer
HS083-01995chr4:176355660-17635617000--
HS083-01996chr4:177139290-17713998000--
HS083-01997chr4:177140060-17714078000--
HS083-01998chr4:177241370-17724220001--
HS083-01999chr4:181311380-18131229000--
HS083-02000chr4:183537330-18353755000--
HS083-02001chr4:188735780-18873656001GeneHancer