EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

EnhancerAtlas 2.0 integrated enhancers from 12 high-throupghput technologies including P300, Histone, POLR2A, TF-binding, DHS, FAIRE, Mnase-seq, GRO-seq, STARR-seq, CAGE, CHIA-PET, and MPRA. Users could click any enhancer to view its detailed information.


HCC1954 | Homo sapiens

Cell type: Epithelial cell | Tissue: Mammary gland; breast/duct | Disease: TNM stage IIA, grade 3, ductal carcinoma.

Tissue/cell description report link(s): >>ExPASy and >>ATCC.

The tissue/cell type 'HCC1954' in Homo sapiens contains 2972 enhancers. Of these enhancers, 166 are associated with 221 SNPs. SNPs Enhancers

Show: chr16>>chr1>>chr2>>chr3>>chr4>>chr5>>chr6>>chr7>>chr8>>chr9>>chr10>>chr11>>chr12>>chr13>>chr14>>chr15>>chr16>>chr17>>chr18>>chr19>>chr20>>chr21>>chr22>>chrX>>chrY>>All


ID Coordinate SNPs TF binding sites Other Evidence
HS083-00829chr16:278780-27927001--
HS083-00830chr16:377060-37823002GeneHancer;dbSUPER;HEDD
HS083-00831chr16:857650-85812002GeneHancer
HS083-00832chr16:1464290-146461000--
HS083-00833chr16:1728360-1730200010dbSUPER
HS083-00834chr16:2479500-247980000--
HS083-00835chr16:2933370-293348000--
HS083-00836chr16:3207570-3209510010dbSUPER
HS083-00837chr16:3210970-321199000GeneHancer;dbSUPER
HS083-00838chr16:4232860-4234280041dbSUPER
HS083-00839chr16:4303350-430364001dbSUPER
HS083-00840chr16:4422000-442238000dbSUPER
HS083-00841chr16:4730100-473081000dbSUPER
HS083-00842chr16:4743880-474397000dbSUPER
HS083-00843chr16:6500640-650097000--
HS083-00844chr16:6829710-683055003--
HS083-00845chr16:9234310-923461000--
HS083-00846chr16:10414390-1041516000--
HS083-00847chr16:10571070-1057128000--
HS083-00848chr16:10837740-1083781001dbSUPER
HS083-00849chr16:10922620-1092341001GeneHancer;dbSUPER;HEDD
HS083-00850chr16:11397040-1139790000GeneHancer;dbSUPER
HS083-00851chr16:11590180-11592870011GeneHancer
HS083-00852chr16:11835970-1183633000dbSUPER
HS083-00853chr16:11945000-1194526000--
HS083-00854chr16:14051360-1405286002GeneHancer;HEDD
HS083-00855chr16:14165220-1416543001--
HS083-00856chr16:14459830-1446004000--
HS083-00857chr16:14493380-1449400000GeneHancer
HS083-00858chr16:15670980-1567226006GeneHancer;dbSUPER
HS083-00859chr16:15981980-1598241000--
HS083-00860chr16:16872710-1687321000--
HS083-00861chr16:18495270-1849603004--
HS083-00862chr16:19776160-1977647000dbSUPER
HS083-00863chr16:22246290-2224650000--
HS083-00864chr16:23795340-2379557000--
HS083-00865chr16:25607140-2560735000--
HS083-00866chr16:26240250-2624047000--
HS083-00867chr16:26646470-2664668000--
HS083-00868chr16:29471310-2947252005dbSUPER
HS083-00869chr16:29623620-2962442000dbSUPER;HEDD
HS083-00870chr16:30077250-3007761000dbSUPER
HS083-00871chr16:30210650-3021192005dbSUPER
HS083-00872chr16:31191550-3119215001--
HS083-00873chr16:31471320-3147156002dbSUPER
HS083-00874chr16:46385660-46436030017GeneHancer
HS083-00875chr16:46630260-4663056000--
HS083-00876chr16:47045890-4704610000--
HS083-00877chr16:48418980-4841911001dbSUPER
HS083-00878chr16:48640930-4864260001dbSUPER
HS083-00879chr16:48643020-4864368000dbSUPER
HS083-00880chr16:50100180-5010027000--
HS083-00881chr16:50186940-5018765008HEDD
HS083-00882chr16:52980790-5298100000--
HS083-00883chr16:53468710-5346955002dbSUPER
HS083-00884chr16:53536050-5353702000dbSUPER
HS083-00885chr16:55533470-5553550005GeneHancer;dbSUPER;HEDD
HS083-00886chr16:56553570-5655365000dbSUPER
HS083-00887chr16:56642600-5664290000dbSUPER
HS083-00888chr16:56642970-5664316000dbSUPER
HS083-00889chr16:56841950-5684274000--
HS083-00890chr16:57496720-5749678000--
HS083-00891chr16:57654050-5765714015dbSUPER;HEDD
HS083-00892chr16:58663160-5866363000dbSUPER
HS083-00893chr16:60918120-6091863000--
HS083-00894chr16:62427010-6242722000--
HS083-00895chr16:63518260-6351848000--
HS083-00896chr16:66914540-6691484001--
HS083-00897chr16:67115170-6711539000--
HS083-00898chr16:67212410-6721271000GeneHancer;dbSUPER
HS083-00899chr16:67274260-6727681004dbSUPER;HEDD
HS083-00900chr16:67438140-6743973002GeneHancer;dbSUPER
HS083-00901chr16:68119690-6812023000dbSUPER
HS083-00902chr16:68298480-6830007001dbSUPER
HS083-00903chr16:68514080-6851541000GeneHancer;dbSUPER
HS083-00904chr16:68640910-6864130000--
HS083-00905chr16:68679330-6867953000dbSUPER
HS083-00906chr16:68777540-6877940001dbSUPER;HEDD
HS083-00907chr16:69105640-6910816003GeneHancer;dbSUPER;HEDD
HS083-00908chr16:70099470-7009965000dbSUPER
HS083-00909chr16:70727390-7072944000dbSUPER
HS083-00910chr16:70729530-7073104011dbSUPER;HEDD
HS083-00911chr16:70748320-7075108004GeneHancer;dbSUPER;HEDD
HS083-00912chr16:70779740-7078332004GeneHancer;dbSUPER;HEDD
HS083-00913chr16:70856880-7085799000--
HS083-00914chr16:71929490-7193023004--
HS083-00915chr16:73822630-7382293002--
HS083-00916chr16:75018490-7501886004--
HS083-00917chr16:75182540-7518316007--
HS083-00918chr16:75519550-7552076002GeneHancer;dbSUPER
HS083-00919chr16:76190190-7619050000--
HS083-00920chr16:77367880-7736849000--
HS083-00921chr16:77706500-7770671000--
HS083-00922chr16:79086260-7908646000--
HS083-00923chr16:81434520-8143543000GeneHancer
HS083-00924chr16:83986980-8398754000dbSUPER
HS083-00925chr16:84534180-84538200012dbSUPER;HEDD
HS083-00926chr16:84733720-8473447000dbSUPER
HS083-00927chr16:84884520-8488614011GeneHancer;dbSUPER
HS083-00928chr16:85386630-8539017002GeneHancer;dbSUPER
HS083-00929chr16:85409160-8541094000GeneHancer;dbSUPER
HS083-00930chr16:85416820-8541925014GeneHancer;dbSUPER
HS083-00931chr16:85471090-8547165002GeneHancer;dbSUPER
HS083-00932chr16:85504840-8550696001GeneHancer;dbSUPER;HEDD
HS083-00933chr16:85547640-8554986005GeneHancer;dbSUPER
HS083-00934chr16:85554550-8555534000GeneHancer;dbSUPER
HS083-00935chr16:85648310-8564915000dbSUPER
HS083-00936chr16:86712790-8671300001dbSUPER
HS083-00937chr16:87491420-8749198000GeneHancer;dbSUPER
HS083-00938chr16:87822750-8782507001GeneHancer;dbSUPER;HEDD
HS083-00939chr16:87839410-8784134004GeneHancer;dbSUPER
HS083-00940chr16:87886000-8788874017GeneHancer;dbSUPER;HEDD
HS083-00941chr16:87901690-8790249002dbSUPER;HEDD
HS083-00942chr16:88278460-8827961006GeneHancer;dbSUPER
HS083-00943chr16:88365790-88367180015GeneHancer;dbSUPER
HS083-00944chr16:88835620-8883810003GeneHancer;dbSUPER;HEDD
HS083-00945chr16:88877350-8887795006dbSUPER
HS083-00946chr16:88878060-8887822000dbSUPER
HS083-00947chr16:89313330-89314510015GeneHancer;HEDD
HS083-00948chr16:89461550-8946240001GeneHancer;dbSUPER
HS083-00949chr16:89542550-8954353002GeneHancer;dbSUPER
HS083-00950chr16:89753210-8975395001--
HS083-00951chr16:89940270-89940940012--
HS083-00952chr16:90173110-9017520000GeneHancer