EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

EnhancerAtlas 2.0 integrated enhancers from 12 high-throupghput technologies including P300, Histone, POLR2A, TF-binding, DHS, FAIRE, Mnase-seq, GRO-seq, STARR-seq, CAGE, CHIA-PET, and MPRA. Users could click any enhancer to view its detailed information.


HCC1954 | Homo sapiens

Cell type: Epithelial cell | Tissue: Mammary gland; breast/duct | Disease: TNM stage IIA, grade 3, ductal carcinoma.

Tissue/cell description report link(s): >>ExPASy and >>ATCC.

The tissue/cell type 'HCC1954' in Homo sapiens contains 2972 enhancers. Of these enhancers, 166 are associated with 221 SNPs. SNPs Enhancers

Show: chr9>>chr1>>chr2>>chr3>>chr4>>chr5>>chr6>>chr7>>chr8>>chr9>>chr10>>chr11>>chr12>>chr13>>chr14>>chr15>>chr16>>chr17>>chr18>>chr19>>chr20>>chr21>>chr22>>chrX>>chrY>>All


ID Coordinate SNPs TF binding sites Other Evidence
HS083-02662chr9:419900-42040000GeneHancer
HS083-02663chr9:470380-47055000--
HS083-02664chr9:470680-47097000--
HS083-02665chr9:1944130-194455000--
HS083-02666chr9:2015400-201694002dbSUPER;HEDD
HS083-02667chr9:2559120-256080001GeneHancer;HEDD
HS083-02668chr9:2843860-284404000--
HS083-02669chr9:3039640-304010000--
HS083-02670chr9:3414690-341519000--
HS083-02671chr9:3504100-350558006--
HS083-02672chr9:3873890-387631003GeneHancer;dbSUPER;HEDD
HS083-02673chr9:3906100-390737011GeneHancer;dbSUPER
HS083-02674chr9:4105140-410780001GeneHancer;dbSUPER
HS083-02675chr9:4136630-413920000GeneHancer;dbSUPER;HEDD
HS083-02676chr9:4507450-450911020GeneHancer;dbSUPER;HEDD
HS083-02677chr9:4666080-466621000dbSUPER
HS083-02678chr9:4735130-473554000--
HS083-02679chr9:4740540-474093000dbSUPER
HS083-02680chr9:4793230-479400011--
HS083-02681chr9:4901420-490247001GeneHancer
HS083-02682chr9:4931910-493450000GeneHancer;dbSUPER
HS083-02683chr9:4985630-498593013dbSUPER
HS083-02684chr9:5435380-543656000dbSUPER
HS083-02685chr9:5499680-550054001GeneHancer;dbSUPER
HS083-02686chr9:5629450-563054000dbSUPER
HS083-02687chr9:5817520-581895003GeneHancer;dbSUPER
HS083-02688chr9:5831620-583268001dbSUPER
HS083-02689chr9:5843080-584511022GeneHancer;dbSUPER;HEDD
HS083-02690chr9:5879300-588090003GeneHancer;dbSUPER;HEDD
HS083-02691chr9:6101520-610412012GeneHancer
HS083-02692chr9:6680480-6682960011GeneHancer;dbSUPER;HEDD
HS083-02693chr9:6703620-670486000dbSUPER
HS083-02694chr9:6758200-675963006dbSUPER
HS083-02695chr9:7019580-701990000--
HS083-02696chr9:7815850-781607000--
HS083-02697chr9:9947210-994766000--
HS083-02698chr9:12783800-1278606010GeneHancer;dbSUPER
HS083-02699chr9:13177940-1317814000--
HS083-02700chr9:13279000-1327939004--
HS083-02701chr9:14030160-1403139003GeneHancer
HS083-02702chr9:14312380-1431348001dbSUPER
HS083-02703chr9:14319980-1432144002dbSUPER
HS083-02704chr9:14692760-1469322000dbSUPER
HS083-02705chr9:15295750-1529779013GeneHancer;dbSUPER;HEDD
HS083-02706chr9:15304790-1530708018dbSUPER;HEDD
HS083-02707chr9:15553300-1555383000--
HS083-02708chr9:15999430-1600111013GeneHancer;dbSUPER
HS083-02709chr9:16012740-1601370002GeneHancer;dbSUPER
HS083-02710chr9:16030530-1603158000GeneHancer;dbSUPER
HS083-02711chr9:16063020-1606400001GeneHancer
HS083-02712chr9:16243210-1624484002GeneHancer
HS083-02713chr9:16245000-1624824004GeneHancer
HS083-02714chr9:16335350-1633832006GeneHancer;dbSUPER
HS083-02715chr9:16342320-1634554005GeneHancer;dbSUPER
HS083-02716chr9:16367540-1636858000GeneHancer;dbSUPER
HS083-02717chr9:16704700-1670582001dbSUPER
HS083-02718chr9:16726610-1672760001dbSUPER
HS083-02719chr9:16907610-1690807004--
HS083-02720chr9:17135420-1713586000--
HS083-02721chr9:19230830-1923127000dbSUPER
HS083-02722chr9:20079730-2007993000--
HS083-02723chr9:20683860-2068456000--
HS083-02724chr9:25309860-2531008000--
HS083-02725chr9:32504710-3250505000--
HS083-02726chr9:33025380-3302602005--
HS083-02727chr9:33290600-3329130000dbSUPER
HS083-02728chr9:33977740-3397808000--
HS083-02729chr9:34126180-3412635000--
HS083-02730chr9:34874260-3487446000--
HS083-02731chr9:37464670-3746521000dbSUPER
HS083-02732chr9:37903270-3790352001dbSUPER
HS083-02733chr9:37903550-3790406000dbSUPER
HS083-02734chr9:38046890-3804919001GeneHancer;dbSUPER
HS083-02735chr9:45441570-4544274002--
HS083-02736chr9:66970850-6697285002--
HS083-02737chr9:69261610-6926233005--
HS083-02738chr9:69709910-6971148002--
HS083-02739chr9:70489200-7048991005--
HS083-02740chr9:70645630-7064694002--
HS083-02741chr9:72374030-7237476004--
HS083-02742chr9:72516880-7251708000--
HS083-02743chr9:75192940-7519480002GeneHancer
HS083-02744chr9:79074220-7907497001--
HS083-02745chr9:83397020-8339723000--
HS083-02746chr9:84363640-8436394001--
HS083-02747chr9:85274610-8527481001--
HS083-02748chr9:85675800-8567735002--
HS083-02749chr9:88556190-8855664001--
HS083-02750chr9:88708760-8870968001GeneHancer;HEDD
HS083-02751chr9:88896690-8889729000--
HS083-02752chr9:88968690-8896918000--
HS083-02753chr9:91635260-9163849003GeneHancer;HEDD
HS083-02754chr9:91752120-9175429007GeneHancer;dbSUPER
HS083-02755chr9:92112520-92113350025dbSUPER
HS083-02756chr9:94912700-9491501001dbSUPER;HEDD
HS083-02757chr9:95215840-9521605000--
HS083-02758chr9:95737030-9573751000dbSUPER
HS083-02759chr9:95749730-9575143001GeneHancer;dbSUPER;HEDD
HS083-02760chr9:96927990-9692823001--
HS083-02761chr9:97075030-9707552000--
HS083-02762chr9:97580760-9758275003GeneHancer;dbSUPER
HS083-02763chr9:97629100-9763457005GeneHancer;dbSUPER
HS083-02764chr9:97681280-9768626005GeneHancer;dbSUPER;HEDD
HS083-02765chr9:97810590-9781144002dbSUPER
HS083-02766chr9:98188700-9818970002--
HS083-02767chr9:100174520-10017474000--
HS083-02768chr9:100745890-10074759004dbSUPER
HS083-02769chr9:100819220-10081972003dbSUPER
HS083-02770chr9:103173830-10317429000GeneHancer
HS083-02771chr9:105683810-10568463000--
HS083-02772chr9:105738660-10573889000--
HS083-02773chr9:107510130-10751064002--
HS083-02774chr9:107730450-10773107002GeneHancer;HEDD
HS083-02775chr9:107753040-10775437001dbSUPER
HS083-02776chr9:110511660-11051482009GeneHancer;dbSUPER
HS083-02777chr9:112013120-11201376000GeneHancer;dbSUPER
HS083-02778chr9:112013790-11201427000GeneHancer;dbSUPER
HS083-02779chr9:112259670-11226049003dbSUPER
HS083-02780chr9:112316920-11232099006GeneHancer;dbSUPER
HS083-02781chr9:113452330-11345284000--
HS083-02782chr9:114246830-11424694000dbSUPER
HS083-02783chr9:114605390-11460751003GeneHancer;dbSUPER
HS083-02784chr9:114629200-11462959001GeneHancer;dbSUPER
HS083-02785chr9:114720350-11472086000GeneHancer;dbSUPER
HS083-02786chr9:115110390-11511194008GeneHancer
HS083-02787chr9:115142460-11514280000--
HS083-02788chr9:116112060-11611218000dbSUPER
HS083-02789chr9:117350200-11735029000dbSUPER
HS083-02790chr9:117373840-11737653002dbSUPER;HEDD
HS083-02791chr9:117380890-11738232004GeneHancer;dbSUPER
HS083-02792chr9:117647160-11764765001GeneHancer;HEDD
HS083-02793chr9:118464380-11846460000--
HS083-02794chr9:119309960-11931243013GeneHancer;dbSUPER
HS083-02795chr9:123963520-12396391000dbSUPER
HS083-02796chr9:125441190-12544161000--
HS083-02797chr9:125703370-12570427002--
HS083-02798chr9:126030500-12603071001dbSUPER
HS083-02799chr9:127020640-12702191000dbSUPER
HS083-02800chr9:127071730-12707236002GeneHancer;dbSUPER
HS083-02801chr9:127421020-12742241002dbSUPER
HS083-02802chr9:127702880-12770324000--
HS083-02803chr9:127728560-12772879002GeneHancer
HS083-02804chr9:129949130-12995031002GeneHancer;dbSUPER
HS083-02805chr9:130098520-13010022009GeneHancer
HS083-02806chr9:130533360-13053346000dbSUPER
HS083-02807chr9:130565680-13056656000dbSUPER
HS083-02808chr9:130566690-13056677000dbSUPER
HS083-02809chr9:130730300-13073243004dbSUPER;HEDD
HS083-02810chr9:130798460-13079876000--
HS083-02811chr9:130844080-13084490004GeneHancer;dbSUPER;HEDD
HS083-02812chr9:131068960-13106944000GeneHancer
HS083-02813chr9:131418080-13141881002HEDD
HS083-02814chr9:131581460-13158170000--
HS083-02815chr9:132175020-13217560000GeneHancer;dbSUPER
HS083-02816chr9:132175750-132176520010GeneHancer;dbSUPER
HS083-02817chr9:132513890-13251516001dbSUPER
HS083-02818chr9:133320380-13332297002dbSUPER;HEDD
HS083-02819chr9:133556490-13355663002GeneHancer
HS083-02820chr9:133802710-13380450001GeneHancer;HEDD
HS083-02821chr9:134247980-13424962002GeneHancer;dbSUPER;HEDD
HS083-02822chr9:136023760-13602434000dbSUPER
HS083-02823chr9:136325310-13632589009--
HS083-02824chr9:136738390-13674034006GeneHancer;dbSUPER;HEDD
HS083-02825chr9:137218510-13721862000dbSUPER
HS083-02826chr9:137246550-137251180010GeneHancer;dbSUPER;HEDD
HS083-02827chr9:137914890-13791552001GeneHancer
HS083-02828chr9:138986220-13898676004dbSUPER
HS083-02829chr9:139009850-13900991000dbSUPER
HS083-02830chr9:139887150-13988737000--
HS083-02831chr9:140135870-14013617001dbSUPER
HS083-02832chr9:140136280-14013636001dbSUPER
HS083-02833chr9:140204810-14020650004GeneHancer;dbSUPER;HEDD
HS083-02834chr9:140500290-14050082013dbSUPER
HS083-02835chr9:140505420-14050734008dbSUPER;HEDD
HS083-02836chr9:141111780-14111382000GeneHancer