EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

EnhancerAtlas 2.0 integrated enhancers from 12 high-throupghput technologies including P300, Histone, POLR2A, TF-binding, DHS, FAIRE, Mnase-seq, GRO-seq, STARR-seq, CAGE, CHIA-PET, and MPRA. Users could click any enhancer to view its detailed information.


HCC1954 | Homo sapiens

Cell type: Epithelial cell | Tissue: Mammary gland; breast/duct | Disease: TNM stage IIA, grade 3, ductal carcinoma.

Tissue/cell description report link(s): >>ExPASy and >>ATCC.

The tissue/cell type 'HCC1954' in Homo sapiens contains 2972 enhancers. Of these enhancers, 166 are associated with 221 SNPs. SNPs Enhancers

Show: chr2>>chr1>>chr2>>chr3>>chr4>>chr5>>chr6>>chr7>>chr8>>chr9>>chr10>>chr11>>chr12>>chr13>>chr14>>chr15>>chr16>>chr17>>chr18>>chr19>>chr20>>chr21>>chr22>>chrX>>chrY>>All


ID Coordinate SNPs TF binding sites Other Evidence
HS083-01334chr2:1628810-163053003GeneHancer;dbSUPER
HS083-01335chr2:3522340-352313000--
HS083-01336chr2:3925320-392554001--
HS083-01337chr2:4325270-432547000--
HS083-01338chr2:5768210-576902003GeneHancer;dbSUPER
HS083-01339chr2:9143600-914366000--
HS083-01340chr2:9614780-961564003--
HS083-01341chr2:10547590-1054859003GeneHancer;dbSUPER
HS083-01342chr2:11231580-11232030020--
HS083-01343chr2:12920660-1292088000--
HS083-01344chr2:13474280-1347475000--
HS083-01345chr2:20101260-2010146000dbSUPER
HS083-01346chr2:20381690-2038523008GeneHancer;dbSUPER;HEDD
HS083-01347chr2:20549810-2055035000dbSUPER
HS083-01348chr2:23608650-2360922002--
HS083-01349chr2:24103140-2410335000--
HS083-01350chr2:27579070-2757960000--
HS083-01351chr2:27651600-2765232004--
HS083-01352chr2:27994670-2799536000dbSUPER
HS083-01353chr2:32264560-3226466000--
HS083-01354chr2:34746540-3474675000--
HS083-01355chr2:34790250-3479046000--
HS083-01356chr2:36593870-3659597001GeneHancer;dbSUPER
HS083-01357chr2:38663090-3866396001GeneHancer;dbSUPER
HS083-01358chr2:38977510-3897837002dbSUPER
HS083-01359chr2:39347040-3934747000dbSUPER
HS083-01360chr2:41382250-4138247000--
HS083-01361chr2:43300710-4330370005GeneHancer;dbSUPER
HS083-01362chr2:43385400-4338714011GeneHancer;dbSUPER;HEDD
HS083-01363chr2:43652630-4365471000GeneHancer;dbSUPER
HS083-01364chr2:46396930-4640040002GeneHancer
HS083-01365chr2:48541950-4854234000dbSUPER
HS083-01366chr2:50851170-5085138000--
HS083-01367chr2:54342890-5434333023--
HS083-01368chr2:57417960-5741842000--
HS083-01369chr2:58468230-5846835000--
HS083-01370chr2:65011020-6501253004GeneHancer
HS083-01371chr2:68600480-6860069000dbSUPER
HS083-01372chr2:68678200-6867897000--
HS083-01373chr2:70335530-7033629006GeneHancer;dbSUPER
HS083-01374chr2:70362740-7036442007GeneHancer;dbSUPER;HEDD
HS083-01375chr2:70417150-7041810005--
HS083-01376chr2:70474960-7047553005--
HS083-01377chr2:70485410-7048594000--
HS083-01378chr2:70519800-7052074000--
HS083-01379chr2:70750370-7075302004GeneHancer;dbSUPER
HS083-01380chr2:71871390-7187344000GeneHancer
HS083-01381chr2:72628510-7262891000--
HS083-01382chr2:75070250-7507401007GeneHancer;dbSUPER;HEDD
HS083-01383chr2:83150270-8315047000--
HS083-01384chr2:83374920-8337561000--
HS083-01385chr2:83568600-8356981007--
HS083-01386chr2:85003680-8500390000--
HS083-01387chr2:85485550-8548656000GeneHancer;dbSUPER;HEDD
HS083-01388chr2:85554900-8555503000dbSUPER
HS083-01389chr2:85968060-8596976002GeneHancer;dbSUPER
HS083-01390chr2:86789730-8679042000--
HS083-01391chr2:88354870-8835514000--
HS083-01392chr2:89563500-8956414000--
HS083-01393chr2:89866530-8988013001GeneHancer
HS083-01394chr2:92267440-9227045003--
HS083-01395chr2:92289520-9229265008--
HS083-01396chr2:92305100-92326320057GeneHancer
HS083-01397chr2:96098760-9610098002GeneHancer;dbSUPER
HS083-01398chr2:97001590-9700214001--
HS083-01399chr2:97552910-9755492005GeneHancer;dbSUPER;HEDD
HS083-01400chr2:98262650-9826280000dbSUPER
HS083-01401chr2:98279990-9828030002dbSUPER
HS083-01402chr2:99061550-9906196000dbSUPER
HS083-01403chr2:100105300-10010627001--
HS083-01404chr2:101373400-10137432001GeneHancer;dbSUPER
HS083-01405chr2:102843370-10284522011GeneHancer;HEDD
HS083-01406chr2:104008720-10400954001--
HS083-01407chr2:104724380-10472459000--
HS083-01408chr2:105664330-10566454000--
HS083-01409chr2:106013160-10601427001dbSUPER
HS083-01410chr2:109151050-10915118000dbSUPER
HS083-01411chr2:109815690-10981645000dbSUPER
HS083-01412chr2:110456180-11045747005GeneHancer;dbSUPER
HS083-01413chr2:110744770-11074490000dbSUPER
HS083-01414chr2:110755910-11075771002GeneHancer;dbSUPER
HS083-01415chr2:110806750-11081180006GeneHancer;dbSUPER
HS083-01416chr2:110857980-11086091004GeneHancer;dbSUPER
HS083-01417chr2:111076710-11107956003dbSUPER
HS083-01418chr2:111129230-11113065001GeneHancer;dbSUPER
HS083-01419chr2:111141770-11114189000dbSUPER
HS083-01420chr2:111434940-11143554003dbSUPER
HS083-01421chr2:111878770-11187971000dbSUPER
HS083-01422chr2:111992520-11199456011GeneHancer;dbSUPER
HS083-01423chr2:112049420-11205132012dbSUPER
HS083-01424chr2:112113610-11211510000GeneHancer;dbSUPER;HEDD
HS083-01425chr2:113342230-11334277001--
HS083-01426chr2:113914000-113916570011dbSUPER;HEDD
HS083-01427chr2:114085430-11408887014GeneHancer;dbSUPER;HEDD
HS083-01428chr2:119225570-11922587000--
HS083-01429chr2:119997770-11999921003GeneHancer;dbSUPER
HS083-01430chr2:120202050-12020252000--
HS083-01431chr2:121161030-12116186000--
HS083-01432chr2:123137900-12313810000--
HS083-01433chr2:128144640-12814634008dbSUPER
HS083-01434chr2:128165040-128165990013GeneHancer;dbSUPER
HS083-01435chr2:128283130-12828375000dbSUPER
HS083-01436chr2:128879650-12887991000--
HS083-01437chr2:129061780-12906412004GeneHancer;dbSUPER
HS083-01438chr2:131085100-13108642004GeneHancer;HEDD
HS083-01439chr2:131850180-13185078002dbSUPER
HS083-01440chr2:133104390-13310513002--
HS083-01441chr2:137103220-13710407000--
HS083-01442chr2:139259690-13926034000dbSUPER;HEDD
HS083-01443chr2:150880680-15088207000--
HS083-01444chr2:155154900-15515534000--
HS083-01445chr2:157256530-15725724001GeneHancer
HS083-01446chr2:159825300-15982577000dbSUPER
HS083-01447chr2:159964200-15996582020GeneHancer;dbSUPER
HS083-01448chr2:160142760-16014287000--
HS083-01449chr2:160226260-16022649000--
HS083-01450chr2:161076150-161087310015GeneHancer;dbSUPER;HEDD
HS083-01451chr2:161093830-16109612000GeneHancer;dbSUPER;HEDD
HS083-01452chr2:161097020-16110076007GeneHancer;dbSUPER;HEDD
HS083-01453chr2:161392130-16139247000--
HS083-01454chr2:161503940-16150567014GeneHancer
HS083-01455chr2:162017000-16201823000dbSUPER
HS083-01456chr2:162165120-16216543001--
HS083-01457chr2:162387910-16238812000--
HS083-01458chr2:162752990-16275322000--
HS083-01459chr2:163200790-16320112000--
HS083-01460chr2:166649240-16665052001HEDD
HS083-01461chr2:169313130-16931371010dbSUPER
HS083-01462chr2:170322330-17032282000--
HS083-01463chr2:170441000-17044183000dbSUPER
HS083-01464chr2:172864920-17286540001--
HS083-01465chr2:173537800-17353884005GeneHancer;HEDD
HS083-01466chr2:173908480-17391066005GeneHancer
HS083-01467chr2:174516650-17451813000GeneHancer;dbSUPER
HS083-01468chr2:174855540-17485711001GeneHancer;dbSUPER;HEDD
HS083-01469chr2:178127830-17812813000dbSUPER
HS083-01470chr2:179059400-17905956000--
HS083-01471chr2:179910420-17991064000dbSUPER
HS083-01472chr2:183989230-18399000000--
HS083-01473chr2:188222200-18822243000--
HS083-01474chr2:191399030-19139928001dbSUPER
HS083-01475chr2:191876660-19187693000dbSUPER
HS083-01476chr2:194380880-19438110000--
HS083-01477chr2:196522010-19652226001dbSUPER
HS083-01478chr2:198299510-19829969000dbSUPER
HS083-01479chr2:198318390-19831869000dbSUPER
HS083-01480chr2:201651920-20165333002GeneHancer;dbSUPER
HS083-01481chr2:204124380-20412468000--
HS083-01482chr2:205447530-20544775000--
HS083-01483chr2:206244880-20624589000--
HS083-01484chr2:211034660-21103574001dbSUPER
HS083-01485chr2:214904060-21490428001--
HS083-01486chr2:216515760-21651598000--
HS083-01487chr2:216974180-21697434000dbSUPER
HS083-01488chr2:217530320-21753115000GeneHancer;dbSUPER
HS083-01489chr2:219384340-21938454000--
HS083-01490chr2:220071760-220071960014--
HS083-01491chr2:220549500-22055209003dbSUPER
HS083-01492chr2:220552790-22055436001dbSUPER
HS083-01493chr2:221063020-22106426002GeneHancer
HS083-01494chr2:223520400-22352073000--
HS083-01495chr2:224282760-22428297000--
HS083-01496chr2:224392290-22439251000--
HS083-01497chr2:225182390-22518260002--
HS083-01498chr2:225966330-22596654000GeneHancer;dbSUPER
HS083-01499chr2:227700800-22770143010dbSUPER
HS083-01500chr2:229581300-22958151000--
HS083-01501chr2:232526640-23252753001GeneHancer;dbSUPER;HEDD
HS083-01502chr2:234696020-23469673000--
HS083-01503chr2:236239370-23623995000GeneHancer
HS083-01504chr2:239112000-23911213000dbSUPER
HS083-01505chr2:239298500-23929907000GeneHancer
HS083-01506chr2:242295800-24229590000dbSUPER