| Tag | Content |
|---|
EnhancerAtlas ID | HS083-01596 |
Organism | Homo sapiens |
Tissue/cell | HCC1954 |
Coordinate | chr20:62257650-62258300 |
Target genes | | Number: 11 | Name | Ensembl ID |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| GLIS2 | MA0736.1 | chr20:62258270-62258284 | CGCCGCGGGGGGGC | - | 6.15 | | ZIC1 | MA0696.1 | chr20:62258270-62258284 | CGCCGCGGGGGGGC | - | 6.13 | | ZIC3 | MA0697.1 | chr20:62258269-62258284 | TCGCCGCGGGGGGGC | - | 6.65 | | ZIC4 | MA0751.1 | chr20:62258269-62258284 | TCGCCGCGGGGGGGC | - | 6.47 |
|
| | Number of super-enhancer constituents: 7 | ID | Coordinate | Tissue/cell |
| SE_16797 | chr20:62257352-62260395 | CD4_Naive_Primary_8pool | | SE_22102 | chr20:62257183-62260789 | CD8_Naive_8pool | | SE_34418 | chr20:62257074-62260720 | HCT-116 | | SE_43229 | chr20:62257113-62260548 | Lung | | SE_53598 | chr20:62257118-62260467 | Spleen | | SE_57660 | chr20:62257319-62259814 | VACO_503 | | SE_66845 | chr20:62257239-62257790 | Jurkat |
|
Enhancer Sequence | GGGTGGTCCC TATGGGTCGC GTCCCTGCGG GTCGGGTGCC TGCGGGGTGG CCCCTGGGAA 60
TCGCGTCCCT GCGGGTCGGG TGCCTGCGGG GTGGCCCCTG GGGATCGCGT CCCTGCGGGT 120
CGGGTGCCTG CGGGGTGGCC CCTGGGGATC GCGTCCCTGC GGGTCGGGTG CCTGCGGGGT 180
GGTCCTTGTG GGTCGCGTCC CTGTGGGGTG GTCCCTGTGG GTCGCGTCCC TGTGGGGTGG 240
CCCCTGCGGG TCGCGTGGTG GCCCCTGCGG GTCGGGTGCC TGCGGGGTGG TCCCTGTGGG 300
TCGCGTCCCT GCGGGTCGGG TGCCTGCGGG GTGGTCCCTG CGGGTCGCAC CCCTGCGGCG 360
TGGTCCCCCC GGGATGGGTC CACCGAGGAG GCCGCTGGAG GCCGAGCCCG CGCCCGCCCG 420
CGGCGCCAAG ATGGAGGCAG GAAGCGCCGC CGCCCGCGCC CGCCACCGCC CGCGCCGCCC 480
GCCTGACGCC GCCGTTGCGC CTGACGCCGC CGCCCGCGCG GCCGCCCCTC CCCCGGCCCT 540
CCCCTCCCCC CGCCGTAACG TCCTGACGCT CCGCAGGGAC CCCTGACTGG ACGGCGGCGC 600
GTGAGCGGAG CGAGAGGCCT CGCCGCGGGG GGGCCGCGGG CTCGCCGGCG 650
|
