EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

EnhancerAtlas 2.0 integrated enhancers from 12 high-throupghput technologies including P300, Histone, POLR2A, TF-binding, DHS, FAIRE, Mnase-seq, GRO-seq, STARR-seq, CAGE, CHIA-PET, and MPRA. Users could click any enhancer to view its detailed information.


HCC1954 | Homo sapiens

Cell type: Epithelial cell | Tissue: Mammary gland; breast/duct | Disease: TNM stage IIA, grade 3, ductal carcinoma.

Tissue/cell description report link(s): >>ExPASy and >>ATCC.

The tissue/cell type 'HCC1954' in Homo sapiens contains 2972 enhancers. Of these enhancers, 166 are associated with 221 SNPs. SNPs Enhancers

Show: chr17>>chr1>>chr2>>chr3>>chr4>>chr5>>chr6>>chr7>>chr8>>chr9>>chr10>>chr11>>chr12>>chr13>>chr14>>chr15>>chr16>>chr17>>chr18>>chr19>>chr20>>chr21>>chr22>>chrX>>chrY>>All


ID Coordinate SNPs TF binding sites Other Evidence
HS083-00953chr17:1157030-115755002--
HS083-00954chr17:1302880-130334003dbSUPER
HS083-00955chr17:1394430-139489000dbSUPER
HS083-00956chr17:1587880-158807000--
HS083-00957chr17:1914500-191733003GeneHancer;dbSUPER;HEDD
HS083-00958chr17:1986520-198864004dbSUPER;HEDD
HS083-00959chr17:2295570-229733019dbSUPER
HS083-00960chr17:3657680-365841003GeneHancer;dbSUPER
HS083-00961chr17:3658560-365869000GeneHancer;dbSUPER
HS083-00962chr17:4267920-426940001dbSUPER
HS083-00963chr17:4458250-445842001--
HS083-00964chr17:5166540-516865005GeneHancer
HS083-00965chr17:6268390-627021003GeneHancer;dbSUPER
HS083-00966chr17:6459420-645970001dbSUPER
HS083-00967chr17:7487280-748769000dbSUPER
HS083-00968chr17:7922780-792342001--
HS083-00969chr17:11237020-1123722000--
HS083-00970chr17:11481320-1148158000--
HS083-00971chr17:12345550-1234657000dbSUPER
HS083-00972chr17:12920630-1292101000--
HS083-00973chr17:16438710-1643952004GeneHancer
HS083-00974chr17:16556120-1655707000--
HS083-00975chr17:16763640-1676488000GeneHancer;dbSUPER
HS083-00976chr17:16917820-1691969001GeneHancer;dbSUPER
HS083-00977chr17:17109000-1710917000dbSUPER
HS083-00978chr17:17739380-1774004002dbSUPER
HS083-00979chr17:18266070-1826668000--
HS083-00980chr17:19552440-1955272000dbSUPER
HS083-00981chr17:22244430-22263140052--
HS083-00982chr17:25878560-2588084007GeneHancer;dbSUPER
HS083-00983chr17:27503060-2750709006dbSUPER;HEDD
HS083-00984chr17:27619450-2762015003dbSUPER
HS083-00985chr17:27620170-2762080004dbSUPER
HS083-00986chr17:29906590-2990934001GeneHancer;dbSUPER;HEDD
HS083-00987chr17:29922140-2992451001GeneHancer;dbSUPER;HEDD
HS083-00988chr17:30454360-3045499001--
HS083-00989chr17:33307640-3330793000--
HS083-00990chr17:33570160-3357227002dbSUPER;HEDD
HS083-00991chr17:34112080-3411256000GeneHancer;dbSUPER
HS083-00992chr17:34900950-3490111001dbSUPER
HS083-00993chr17:34901670-3490285001dbSUPER
HS083-00994chr17:35736380-3573659000--
HS083-00995chr17:36441380-3644298002GeneHancer;dbSUPER;HEDD
HS083-00996chr17:36475970-3647650000GeneHancer
HS083-00997chr17:36476650-3647724000GeneHancer
HS083-00998chr17:36610190-3661178003dbSUPER
HS083-00999chr17:36747630-3674903001GeneHancer;dbSUPER
HS083-01000chr17:37213410-3721364001--
HS083-01001chr17:37432750-3743306000--
HS083-01002chr17:37641080-3764332017GeneHancer;HEDD
HS083-01003chr17:37644920-3764680001HEDD
HS083-01004chr17:37649140-3765077008HEDD
HS083-01005chr17:37650950-3765520002--
HS083-01006chr17:37657690-37665950012GeneHancer;HEDD
HS083-01007chr17:37666020-3766778003--
HS083-01008chr17:37676340-3768092007--
HS083-01009chr17:37762860-3776398003GeneHancer;dbSUPER
HS083-01010chr17:37786300-3778833004GeneHancer;dbSUPER;HEDD
HS083-01011chr17:37829900-3783024000GeneHancer;dbSUPER
HS083-01012chr17:37830310-3783086010GeneHancer;dbSUPER;HEDD
HS083-01013chr17:37830930-3783934039GeneHancer;dbSUPER;HEDD
HS083-01014chr17:37856560-3786324005dbSUPER;HEDD
HS083-01015chr17:37863460-3786457001GeneHancer;dbSUPER
HS083-01016chr17:37866140-3786633000GeneHancer;dbSUPER
HS083-01017chr17:37868700-3787153003GeneHancer;dbSUPER
HS083-01018chr17:37882910-3788306000--
HS083-01019chr17:37883260-3788354000--
HS083-01020chr17:37885860-3788593000--
HS083-01021chr17:37886020-3788644001--
HS083-01022chr17:37896440-3789850005dbSUPER;HEDD
HS083-01023chr17:37899310-3789943000--
HS083-01024chr17:37900460-3790080001--
HS083-01025chr17:37900920-3790113000--
HS083-01026chr17:37901240-3790149004--
HS083-01027chr17:37922750-37933900027dbSUPER;HEDD
HS083-01028chr17:37939480-3794451018GeneHancer;dbSUPER
HS083-01029chr17:37944630-3794766006GeneHancer;dbSUPER
HS083-01030chr17:37949190-37966560223GeneHancer;dbSUPER;HEDD
HS083-01031chr17:37966720-37985630456GeneHancer;dbSUPER;HEDD
HS083-01032chr17:38002990-3800676027GeneHancer;dbSUPER;HEDD
HS083-01033chr17:38006860-3801214015GeneHancer;dbSUPER;HEDD
HS083-01034chr17:38012330-38016560010dbSUPER
HS083-01035chr17:38038560-38060840932GeneHancer;HEDD
HS083-01036chr17:38066180-3806857053--
HS083-01037chr17:38068750-3807333038dbSUPER;HEDD
HS083-01038chr17:38080480-38083730013dbSUPER
HS083-01039chr17:38097800-3810018003--
HS083-01040chr17:38100990-38109220012HEDD
HS083-01041chr17:38119340-38121930036HEDD
HS083-01042chr17:38128870-3813006002GeneHancer;HEDD
HS083-01043chr17:38279340-3827953000dbSUPER
HS083-01044chr17:38279630-3827992000dbSUPER
HS083-01045chr17:38444340-3844462000dbSUPER
HS083-01046chr17:39058590-3906014003GeneHancer;dbSUPER
HS083-01047chr17:39504890-3950559002GeneHancer;dbSUPER;HEDD
HS083-01048chr17:39672520-3967305000dbSUPER
HS083-01049chr17:39673220-3967333000dbSUPER;HEDD
HS083-01050chr17:39680270-3968039000dbSUPER
HS083-01051chr17:39694640-3969604004GeneHancer;dbSUPER;HEDD
HS083-01052chr17:39806450-39813470016GeneHancer;dbSUPER;HEDD
HS083-01053chr17:39845320-3984602000dbSUPER
HS083-01054chr17:39928620-3992981000GeneHancer;dbSUPER
HS083-01055chr17:39956710-3995773012GeneHancer;dbSUPER;HEDD
HS083-01056chr17:40118910-4011936001dbSUPER
HS083-01057chr17:40124140-4012549001GeneHancer;dbSUPER
HS083-01058chr17:40427820-4042826002dbSUPER
HS083-01059chr17:40539160-4054029000dbSUPER
HS083-01060chr17:40573680-4057464006dbSUPER
HS083-01061chr17:40719670-4071995000dbSUPER
HS083-01062chr17:41115160-4111536000--
HS083-01063chr17:41116260-4111641000--
HS083-01064chr17:41437590-41439420017dbSUPER
HS083-01065chr17:41465430-4146565000dbSUPER
HS083-01066chr17:41495080-4149743007GeneHancer;dbSUPER;HEDD
HS083-01067chr17:42164310-4216477011GeneHancer;dbSUPER
HS083-01068chr17:42392980-4239335000GeneHancer
HS083-01069chr17:42579990-4258069000--
HS083-01070chr17:43447980-4345028006GeneHancer
HS083-01071chr17:43545960-4354764003GeneHancer;dbSUPER;HEDD
HS083-01072chr17:43981250-4398178000dbSUPER
HS083-01073chr17:44343930-4434492002--
HS083-01074chr17:44438130-4443903001dbSUPER
HS083-01075chr17:44656020-4465696001dbSUPER
HS083-01076chr17:46632980-4663503004dbSUPER
HS083-01077chr17:47646210-4764654000dbSUPER
HS083-01078chr17:47866210-4786689013--
HS083-01079chr17:48138100-4814141005dbSUPER;HEDD
HS083-01080chr17:48535390-4853710003GeneHancer;dbSUPER;HEDD
HS083-01081chr17:48714910-4871896009dbSUPER;HEDD
HS083-01082chr17:48996680-4899833005GeneHancer;dbSUPER;HEDD
HS083-01083chr17:53315410-5331614001GeneHancer;HEDD
HS083-01084chr17:54958340-5495863000dbSUPER
HS083-01085chr17:55163440-5516373000dbSUPER
HS083-01086chr17:55434230-5543644002GeneHancer;dbSUPER;HEDD
HS083-01087chr17:55483950-5548672007GeneHancer;dbSUPER
HS083-01088chr17:55966960-5596852000GeneHancer;dbSUPER
HS083-01089chr17:56083890-5608430000dbSUPER
HS083-01090chr17:56742660-5674671002GeneHancer;HEDD
HS083-01091chr17:57298110-5729836001--
HS083-01092chr17:57918700-57925620010dbSUPER;HEDD
HS083-01093chr17:59915560-5991576000--
HS083-01094chr17:60856010-6085773006GeneHancer;dbSUPER
HS083-01095chr17:60896750-6089822006GeneHancer;dbSUPER
HS083-01096chr17:61700120-6170087001dbSUPER
HS083-01097chr17:61724120-6172579000GeneHancer;dbSUPER
HS083-01098chr17:61817850-6181910002--
HS083-01099chr17:61918650-6191981001dbSUPER
HS083-01100chr17:62223830-6222472000dbSUPER
HS083-01101chr17:62402920-6240410000GeneHancer;dbSUPER
HS083-01102chr17:62745010-6274522000GeneHancer;dbSUPER
HS083-01103chr17:62790000-6279199001GeneHancer;dbSUPER
HS083-01104chr17:64463070-6446359002GeneHancer;dbSUPER
HS083-01105chr17:64671560-6467331003GeneHancer
HS083-01106chr17:65633140-6563631003GeneHancer;HEDD
HS083-01107chr17:66068010-6606910001--
HS083-01108chr17:66452040-6645316000dbSUPER;HEDD
HS083-01109chr17:69284850-6928507000--
HS083-01110chr17:69604500-6960484000--
HS083-01111chr17:69606230-6960682001--
HS083-01112chr17:70417620-7041996006GeneHancer;dbSUPER
HS083-01113chr17:71303730-7130551000dbSUPER
HS083-01114chr17:71424310-7142451001--
HS083-01115chr17:72118930-7211914001--
HS083-01116chr17:72987830-7299151008GeneHancer;dbSUPER;HEDD
HS083-01117chr17:73119960-7312124002GeneHancer;dbSUPER;HEDD
HS083-01118chr17:73544830-7354656004GeneHancer;dbSUPER;HEDD
HS083-01119chr17:73688560-7368951000GeneHancer;dbSUPER
HS083-01120chr17:73689560-7369199001GeneHancer;dbSUPER;HEDD
HS083-01121chr17:73695950-7369754000GeneHancer;dbSUPER;HEDD
HS083-01122chr17:73775320-7377573001dbSUPER
HS083-01123chr17:73872180-7387234001dbSUPER
HS083-01124chr17:74058540-7405886000--
HS083-01125chr17:74349320-7434961001dbSUPER
HS083-01126chr17:74496890-7449743000dbSUPER
HS083-01127chr17:75389870-7539135002GeneHancer;dbSUPER;HEDD
HS083-01128chr17:75472860-75474220016dbSUPER
HS083-01129chr17:76250260-7625092001dbSUPER
HS083-01130chr17:76677120-7667884000GeneHancer;dbSUPER;HEDD
HS083-01131chr17:77022560-7702345001dbSUPER;HEDD
HS083-01132chr17:78234700-7823587004dbSUPER
HS083-01133chr17:78427810-7842922001--
HS083-01134chr17:79817810-7981820000dbSUPER
HS083-01135chr17:80289930-8029102006dbSUPER
HS083-01136chr17:80454830-8045562001GeneHancer;dbSUPER;HEDD
HS083-01137chr17:80606010-8060614000dbSUPER
HS083-01138chr17:81008690-8100961009dbSUPER
HS083-01139chr17:81155020-8115683002GeneHancer