EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

EnhancerAtlas 2.0 integrated enhancers from 12 high-throupghput technologies including P300, Histone, POLR2A, TF-binding, DHS, FAIRE, Mnase-seq, GRO-seq, STARR-seq, CAGE, CHIA-PET, and MPRA. Users could click any enhancer to view its detailed information.


HCC1954 | Homo sapiens

Cell type: Epithelial cell | Tissue: Mammary gland; breast/duct | Disease: TNM stage IIA, grade 3, ductal carcinoma.

Tissue/cell description report link(s): >>ExPASy and >>ATCC.

The tissue/cell type 'HCC1954' in Homo sapiens contains 2972 enhancers. Of these enhancers, 166 are associated with 221 SNPs. SNPs Enhancers

Show: chr21>>chr1>>chr2>>chr3>>chr4>>chr5>>chr6>>chr7>>chr8>>chr9>>chr10>>chr11>>chr12>>chr13>>chr14>>chr15>>chr16>>chr17>>chr18>>chr19>>chr20>>chr21>>chr22>>chrX>>chrY>>All


ID Coordinate SNPs TF binding sites Other Evidence
HS083-01599chr21:10819220-1082022000--
HS083-01600chr21:10856660-1085705000--
HS083-01601chr21:18344750-1834554000--
HS083-01602chr21:18826400-1882733000GeneHancer
HS083-01603chr21:18885490-1888623000--
HS083-01604chr21:18984400-1898501000--
HS083-01605chr21:23902080-2390229002--
HS083-01606chr21:24124600-2412483000--
HS083-01607chr21:25551940-2555216001--
HS083-01608chr21:27758380-2776416004GeneHancer;dbSUPER
HS083-01609chr21:30256830-3025753000--
HS083-01610chr21:30391150-3039153000--
HS083-01611chr21:30397100-3039780001--
HS083-01612chr21:32915370-3291631000HEDD
HS083-01613chr21:33032160-3303273002--
HS083-01614chr21:34697440-3469768000dbSUPER
HS083-01615chr21:34751910-3475349000GeneHancer;dbSUPER;HEDD
HS083-01616chr21:34800450-3480259001GeneHancer;dbSUPER;HEDD
HS083-01617chr21:35220520-3522117000GeneHancer
HS083-01618chr21:35446050-3544666003--
HS083-01619chr21:36207420-3620975035GeneHancer;dbSUPER;HEDD
HS083-01620chr21:36236050-3623949038GeneHancer;dbSUPER;HEDD
HS083-01621chr21:36323600-3632381001GeneHancer;dbSUPER
HS083-01622chr21:36418900-3642113004dbSUPER;HEDD
HS083-01623chr21:36628500-3663023001GeneHancer;dbSUPER
HS083-01624chr21:36637240-3663951005GeneHancer;dbSUPER
HS083-01625chr21:37142080-3714241000--
HS083-01626chr21:37432000-3743257000--
HS083-01627chr21:37485790-37486560014GeneHancer;dbSUPER
HS083-01628chr21:37507780-3750898001dbSUPER
HS083-01629chr21:37527780-3752851000dbSUPER;HEDD
HS083-01630chr21:37669930-3767118000GeneHancer;dbSUPER;HEDD
HS083-01631chr21:37692600-37693720010dbSUPER
HS083-01632chr21:37757750-3775795000--
HS083-01633chr21:38629840-3863134002GeneHancer;dbSUPER;HEDD
HS083-01634chr21:38638590-3863953001dbSUPER
HS083-01635chr21:39407240-3940745000--
HS083-01636chr21:40554930-4055517000--
HS083-01637chr21:40692790-4069472003GeneHancer;HEDD
HS083-01638chr21:40720370-4072047000--
HS083-01639chr21:40720500-4072082001--
HS083-01640chr21:41031840-4103248000GeneHancer;dbSUPER
HS083-01641chr21:41689840-4169007000GeneHancer;dbSUPER
HS083-01642chr21:42571750-4257197000--
HS083-01643chr21:43050050-4305078004GeneHancer;dbSUPER;HEDD
HS083-01644chr21:43061050-4306412005GeneHancer;dbSUPER;HEDD
HS083-01645chr21:43099670-4310386006GeneHancer;dbSUPER;HEDD
HS083-01646chr21:43146550-43148240036GeneHancer;dbSUPER
HS083-01647chr21:43181300-4318676007dbSUPER;HEDD
HS083-01648chr21:43429760-4343036002dbSUPER
HS083-01649chr21:44313490-4431405001--
HS083-01650chr21:44394780-4439635002dbSUPER;HEDD
HS083-01651chr21:44985060-4498561003HEDD
HS083-01652chr21:46237400-4623786001--
HS083-01653chr21:46346920-4634753000dbSUPER
HS083-01654chr21:46347580-4634776000dbSUPER
HS083-01655chr21:47130420-4713063000--
HS083-01656chr21:48055680-48056110010dbSUPER