EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

EnhancerAtlas 2.0 integrated enhancers from 12 high-throupghput technologies including P300, Histone, POLR2A, TF-binding, DHS, FAIRE, Mnase-seq, GRO-seq, STARR-seq, CAGE, CHIA-PET, and MPRA. Users could click any enhancer to view its detailed information.


HCC1954 | Homo sapiens

Cell type: Epithelial cell | Tissue: Mammary gland; breast/duct | Disease: TNM stage IIA, grade 3, ductal carcinoma.

Tissue/cell description report link(s): >>ExPASy and >>ATCC.

The tissue/cell type 'HCC1954' in Homo sapiens contains 2972 enhancers. Of these enhancers, 166 are associated with 221 SNPs. SNPs Enhancers

Show: chr12>>chr1>>chr2>>chr3>>chr4>>chr5>>chr6>>chr7>>chr8>>chr9>>chr10>>chr11>>chr12>>chr13>>chr14>>chr15>>chr16>>chr17>>chr18>>chr19>>chr20>>chr21>>chr22>>chrX>>chrY>>All


ID Coordinate SNPs TF binding sites Other Evidence
HS083-00532chr12:611700-61300000GeneHancer;dbSUPER;HEDD
HS083-00533chr12:1057930-105876001--
HS083-00534chr12:2922020-292261000--
HS083-00535chr12:3000160-300082000--
HS083-00536chr12:4430470-443062000--
HS083-00537chr12:6381030-638334002GeneHancer;dbSUPER
HS083-00538chr12:6422350-642279000dbSUPER
HS083-00539chr12:6644640-664515000dbSUPER
HS083-00540chr12:6677090-667730000--
HS083-00541chr12:6797810-679826007--
HS083-00542chr12:7349740-735017000GeneHancer
HS083-00543chr12:8122720-812388001GeneHancer;dbSUPER;HEDD
HS083-00544chr12:9600160-960057000--
HS083-00545chr12:12848870-1284899000--
HS083-00546chr12:12879030-1287931001dbSUPER
HS083-00547chr12:13961290-1396152000--
HS083-00548chr12:14464330-1446454000dbSUPER
HS083-00549chr12:17889880-1789010001--
HS083-00550chr12:20704210-2070465000GeneHancer;dbSUPER
HS083-00551chr12:34122490-3412270000--
HS083-00552chr12:34509020-3451010005dbSUPER
HS083-00553chr12:40641170-4064156000GeneHancer;dbSUPER
HS083-00554chr12:41686340-4168755000GeneHancer
HS083-00555chr12:41796130-4179649000--
HS083-00556chr12:43149600-4315673019GeneHancer;dbSUPER
HS083-00557chr12:43351380-4335528014GeneHancer;dbSUPER
HS083-00558chr12:45627390-4562998001GeneHancer;dbSUPER;HEDD
HS083-00559chr12:46383450-4638413000dbSUPER
HS083-00560chr12:46777940-4677968002dbSUPER
HS083-00561chr12:48145920-4814978008dbSUPER;HEDD
HS083-00562chr12:49880410-4988062000--
HS083-00563chr12:50236160-5023663000--
HS083-00564chr12:50910630-5091084000GeneHancer;dbSUPER
HS083-00565chr12:52540490-5254264002GeneHancer;dbSUPER;HEDD
HS083-00566chr12:52674320-5267597005GeneHancer;dbSUPER;HEDD
HS083-00567chr12:53364990-5336628001GeneHancer;dbSUPER;HEDD
HS083-00568chr12:53400280-5340116001--
HS083-00569chr12:56842540-5684309002--
HS083-00570chr12:57029120-5702962001dbSUPER
HS083-00571chr12:57145890-5714597000--
HS083-00572chr12:58281240-5828441003dbSUPER;HEDD
HS083-00573chr12:64759500-6476019000--
HS083-00574chr12:64845970-6484674003--
HS083-00575chr12:69622040-6962320000--
HS083-00576chr12:69753800-6975479000--
HS083-00577chr12:74262020-7426224000--
HS083-00578chr12:74781390-7478171000--
HS083-00579chr12:76477930-7647834000dbSUPER
HS083-00580chr12:76515480-7651618000--
HS083-00581chr12:77158110-7715837001--
HS083-00582chr12:78296140-7829636000--
HS083-00583chr12:81902620-8190283000--
HS083-00584chr12:83843990-8384419000--
HS083-00585chr12:84288060-8428827003--
HS083-00586chr12:84295780-8429599000--
HS083-00587chr12:85009440-8501009000--
HS083-00588chr12:85796690-8579692001--
HS083-00589chr12:87311240-8731145000--
HS083-00590chr12:89095080-8909577000--
HS083-00591chr12:89108820-8910936000--
HS083-00592chr12:93473940-9347572003GeneHancer
HS083-00593chr12:93707970-9370872006GeneHancer
HS083-00594chr12:96494820-9649520000--
HS083-00595chr12:96612800-9661419001GeneHancer;dbSUPER
HS083-00596chr12:98897350-9889753000dbSUPER
HS083-00597chr12:99025200-9902550011--
HS083-00598chr12:101274720-10127492000--
HS083-00599chr12:101377940-10137824000--
HS083-00600chr12:103416680-10341707000--
HS083-00601chr12:104997600-10499858002GeneHancer;dbSUPER;HEDD
HS083-00602chr12:106752000-10675299000--
HS083-00603chr12:108079750-10807984000--
HS083-00604chr12:109249460-10925120010dbSUPER;HEDD
HS083-00605chr12:111806620-11180671000--
HS083-00606chr12:112297600-11229789000--
HS083-00607chr12:112545720-11254651001dbSUPER
HS083-00608chr12:116173130-11617334000--
HS083-00609chr12:120554090-12055440000dbSUPER
HS083-00610chr12:120668540-12067106013dbSUPER;HEDD
HS083-00611chr12:120729540-12073012002dbSUPER
HS083-00612chr12:121019060-12101914000--
HS083-00613chr12:121362810-12136566041GeneHancer;dbSUPER;HEDD
HS083-00614chr12:121664860-12166605011GeneHancer;dbSUPER;HEDD
HS083-00615chr12:121692940-12169329001--
HS083-00616chr12:122688350-12268872000--
HS083-00617chr12:122840060-12284036000--
HS083-00618chr12:122884490-12288614003dbSUPER
HS083-00619chr12:123849250-12384931000dbSUPER
HS083-00620chr12:128568380-12856925000--
HS083-00621chr12:128569660-12857000001--
HS083-00622chr12:129825210-12982543000--
HS083-00623chr12:131356670-13135678000--
HS083-00624chr12:132344950-13234594005GeneHancer;dbSUPER;HEDD
HS083-00625chr12:132568940-13256915000--
HS083-00626chr12:133532330-13353282001--