EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

EnhancerAtlas 2.0 integrated enhancers from 12 high-throupghput technologies including P300, Histone, POLR2A, TF-binding, DHS, FAIRE, Mnase-seq, GRO-seq, STARR-seq, CAGE, CHIA-PET, and MPRA. Users could click any enhancer to view its detailed information.


HCC1954 | Homo sapiens

Cell type: Epithelial cell | Tissue: Mammary gland; breast/duct | Disease: TNM stage IIA, grade 3, ductal carcinoma.

Tissue/cell description report link(s): >>ExPASy and >>ATCC.

The tissue/cell type 'HCC1954' in Homo sapiens contains 2972 enhancers. Of these enhancers, 166 are associated with 221 SNPs. SNPs Enhancers

Show: chrX>>chr1>>chr2>>chr3>>chr4>>chr5>>chr6>>chr7>>chr8>>chr9>>chr10>>chr11>>chr12>>chr13>>chr14>>chr15>>chr16>>chr17>>chr18>>chr19>>chr20>>chr21>>chr22>>chrX>>chrY>>All


ID Coordinate SNPs TF binding sites Other Evidence
HS083-02837chrX:1510280-151079009--
HS083-02838chrX:1847020-184723000--
HS083-02839chrX:2547420-255104004GeneHancer
HS083-02840chrX:2846770-284727003--
HS083-02841chrX:2944310-294514001GeneHancer
HS083-02842chrX:3732310-373405003GeneHancer;HEDD
HS083-02843chrX:3913170-391374000--
HS083-02844chrX:3913820-391509000--
HS083-02845chrX:4360790-436112000--
HS083-02846chrX:4588440-458935000--
HS083-02847chrX:7065980-706609000dbSUPER
HS083-02848chrX:8248550-824899000--
HS083-02849chrX:8989690-899124000--
HS083-02850chrX:12822550-1282402004--
HS083-02851chrX:12993290-1299386000dbSUPER
HS083-02852chrX:13061980-1306265000--
HS083-02853chrX:13415500-1341794003GeneHancer;dbSUPER
HS083-02854chrX:13671430-1367225000--
HS083-02855chrX:14047230-1404789000--
HS083-02856chrX:14159630-1415985000--
HS083-02857chrX:15040720-1504144000--
HS083-02858chrX:15693080-1569381000dbSUPER
HS083-02859chrX:17998160-1799837000--
HS083-02860chrX:19362210-1936241000--
HS083-02861chrX:21148040-2114827000--
HS083-02862chrX:21240720-2124092000--
HS083-02863chrX:26102750-2610391002--
HS083-02864chrX:27421560-2742204000--
HS083-02865chrX:29934390-2993461000--
HS083-02866chrX:30037340-3003815000--
HS083-02867chrX:37208720-3720924000--
HS083-02868chrX:39967790-3996885001GeneHancer;dbSUPER;HEDD
HS083-02869chrX:41193550-4119448005dbSUPER
HS083-02870chrX:41771290-4177151000--
HS083-02871chrX:43636270-4363649000--
HS083-02872chrX:44164850-4416569001GeneHancer;HEDD
HS083-02873chrX:44534100-4453494002GeneHancer
HS083-02874chrX:44995620-4499684006--
HS083-02875chrX:46118830-4612174006GeneHancer;dbSUPER
HS083-02876chrX:46185890-4618698001GeneHancer;dbSUPER
HS083-02877chrX:46242860-4624327000--
HS083-02878chrX:46652230-4665458002GeneHancer;dbSUPER
HS083-02879chrX:46810540-4681075000dbSUPER
HS083-02880chrX:46895540-4689575000--
HS083-02881chrX:47092620-4709373005dbSUPER
HS083-02882chrX:47420650-4742134001--
HS083-02883chrX:48660550-4866098000dbSUPER
HS083-02884chrX:48957660-4895798000--
HS083-02885chrX:49821880-4982246000--
HS083-02886chrX:51894940-5189514001--
HS083-02887chrX:53054030-5305533000--
HS083-02888chrX:53102960-5310361000--
HS083-02889chrX:53710400-5371211003--
HS083-02890chrX:54556850-5455714000--
HS083-02891chrX:55791900-5579212000--
HS083-02892chrX:56794010-5679581001GeneHancer;dbSUPER
HS083-02893chrX:56798500-5680030001GeneHancer;dbSUPER
HS083-02894chrX:56800380-5680120000GeneHancer
HS083-02895chrX:56803980-5680666001GeneHancer;dbSUPER
HS083-02896chrX:57724420-5772519000--
HS083-02897chrX:58072550-5807332000--
HS083-02898chrX:58563370-58582120034--
HS083-02899chrX:61681950-61725970085--
HS083-02900chrX:63532220-6353244002--
HS083-02901chrX:63759030-6375923001--
HS083-02902chrX:63995990-6399621000--
HS083-02903chrX:65256600-6525746000--
HS083-02904chrX:65433150-6543336000--
HS083-02905chrX:66133390-6613361000--
HS083-02906chrX:66301420-6630164000--
HS083-02907chrX:66328340-6632857000--
HS083-02908chrX:66392600-6639282000--
HS083-02909chrX:67677280-6767759000--
HS083-02910chrX:70586420-7058716000--
HS083-02911chrX:71458620-7145869000--
HS083-02912chrX:72639640-7263985000--
HS083-02913chrX:75312950-7531325001--
HS083-02914chrX:75364430-7536520002GeneHancer;dbSUPER
HS083-02915chrX:78111340-7811156002--
HS083-02916chrX:78673390-7867360000--
HS083-02917chrX:79941450-7994168000--
HS083-02918chrX:81228620-8122883000--
HS083-02919chrX:84129620-8413001000--
HS083-02920chrX:84605620-8460584000--
HS083-02921chrX:86279680-8628020000--
HS083-02922chrX:88231580-8823223000--
HS083-02923chrX:89480420-8948086000--
HS083-02924chrX:94774650-9477486000--
HS083-02925chrX:95792840-9579420002GeneHancer;HEDD
HS083-02926chrX:97614760-9761496001--
HS083-02927chrX:102400470-10240067000--
HS083-02928chrX:104784690-10478503000--
HS083-02929chrX:105325430-10532564000--
HS083-02930chrX:108051380-10805160000--
HS083-02931chrX:110818810-11081904000--
HS083-02932chrX:113621340-11362193000--
HS083-02933chrX:114959720-11496168001GeneHancer
HS083-02934chrX:114962030-11496484004GeneHancer
HS083-02935chrX:114964990-11496751004GeneHancer
HS083-02936chrX:114968010-11497071004GeneHancer
HS083-02937chrX:114973860-11497674004GeneHancer
HS083-02938chrX:114982950-11498568004GeneHancer
HS083-02939chrX:114986030-11498862004GeneHancer
HS083-02940chrX:114989440-11499161001GeneHancer
HS083-02941chrX:114991820-11499457004GeneHancer
HS083-02942chrX:114994810-11499762006GeneHancer
HS083-02943chrX:115003440-11500570003GeneHancer
HS083-02944chrX:115369060-11537240003GeneHancer;HEDD
HS083-02945chrX:115881760-11588197000--
HS083-02946chrX:116667570-11666777000--
HS083-02947chrX:118088270-11808848000--
HS083-02948chrX:118634790-11863811003GeneHancer;dbSUPER;HEDD
HS083-02949chrX:119378420-11937861000--
HS083-02950chrX:119922000-11992222000--
HS083-02951chrX:120701220-12070142001--
HS083-02952chrX:135332850-13533344001--
HS083-02953chrX:140448240-14044846000--
HS083-02954chrX:142875900-14287610001--
HS083-02955chrX:143279970-14328018000--
HS083-02956chrX:145727080-14572738000--
HS083-02957chrX:149418380-14941859001--
HS083-02958chrX:149862150-14986302001--
HS083-02959chrX:151140270-15114289003--
HS083-02960chrX:153362410-15336306003--
HS083-02961chrX:154204880-15420511000--