EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

EnhancerAtlas 2.0 integrated enhancers from 12 high-throupghput technologies including P300, Histone, POLR2A, TF-binding, DHS, FAIRE, Mnase-seq, GRO-seq, STARR-seq, CAGE, CHIA-PET, and MPRA. Users could click any enhancer to view its detailed information.


HCC1954 | Homo sapiens

Cell type: Epithelial cell | Tissue: Mammary gland; breast/duct | Disease: TNM stage IIA, grade 3, ductal carcinoma.

Tissue/cell description report link(s): >>ExPASy and >>ATCC.

The tissue/cell type 'HCC1954' in Homo sapiens contains 2972 enhancers. Of these enhancers, 166 are associated with 221 SNPs. SNPs Enhancers

Show: chr6>>chr1>>chr2>>chr3>>chr4>>chr5>>chr6>>chr7>>chr8>>chr9>>chr10>>chr11>>chr12>>chr13>>chr14>>chr15>>chr16>>chr17>>chr18>>chr19>>chr20>>chr21>>chr22>>chrX>>chrY>>All


ID Coordinate SNPs TF binding sites Other Evidence
HS083-02177chr6:292560-29330001dbSUPER
HS083-02178chr6:692300-69301006--
HS083-02179chr6:906540-90710000--
HS083-02180chr6:1641280-164206003GeneHancer
HS083-02181chr6:2988270-298866000dbSUPER
HS083-02182chr6:3750100-375150003dbSUPER
HS083-02183chr6:3918920-392026011GeneHancer;HEDD
HS083-02184chr6:6820590-682150002GeneHancer;dbSUPER
HS083-02185chr6:7261100-726198003GeneHancer;dbSUPER
HS083-02186chr6:8101770-810266000--
HS083-02187chr6:10315540-1031764000GeneHancer;HEDD
HS083-02188chr6:10383620-1038403000GeneHancer;dbSUPER
HS083-02189chr6:10723480-1072386000dbSUPER
HS083-02190chr6:10748120-1074836000dbSUPER
HS083-02191chr6:12472070-1247317005GeneHancer
HS083-02192chr6:12621710-1262192000--
HS083-02193chr6:13395170-1339951005GeneHancer;dbSUPER;HEDD
HS083-02194chr6:13615860-1361594000--
HS083-02195chr6:13616000-1361622000--
HS083-02196chr6:13724070-1372596002GeneHancer
HS083-02197chr6:15065290-1506786009GeneHancer;dbSUPER;HEDD
HS083-02198chr6:15229250-1522945003--
HS083-02199chr6:18264230-1826461000dbSUPER
HS083-02200chr6:19804240-1980542002--
HS083-02201chr6:21021810-2102424000GeneHancer
HS083-02202chr6:21544140-2154434000--
HS083-02203chr6:24775730-2477620000--
HS083-02204chr6:26158840-2615987011dbSUPER
HS083-02205chr6:26402640-2640297000--
HS083-02206chr6:27068260-2706878000--
HS083-02207chr6:28321220-2832318011dbSUPER;HEDD
HS083-02208chr6:30539340-3053987001--
HS083-02209chr6:30709980-3071030001dbSUPER
HS083-02210chr6:30736480-3073824021GeneHancer;dbSUPER;HEDD
HS083-02211chr6:30882250-3088249010dbSUPER
HS083-02212chr6:31165660-3116621000dbSUPER;HEDD
HS083-02213chr6:31396890-3139770020--
HS083-02214chr6:33176420-3317650001--
HS083-02215chr6:33217430-3321756000--
HS083-02216chr6:33359780-3336036000--
HS083-02217chr6:33589470-3359024003dbSUPER
HS083-02218chr6:33678850-3367932004dbSUPER
HS083-02219chr6:33806880-3380923008GeneHancer;dbSUPER;HEDD
HS083-02220chr6:34191500-3419235017GeneHancer;dbSUPER;HEDD
HS083-02221chr6:34358600-3436004000dbSUPER
HS083-02222chr6:35359090-3536092004GeneHancer;dbSUPER;HEDD
HS083-02223chr6:35452670-3545423007dbSUPER
HS083-02224chr6:35888590-3588882000--
HS083-02225chr6:36649740-3665179004dbSUPER;HEDD
HS083-02226chr6:36799190-3679939000--
HS083-02227chr6:37401150-3740142001--
HS083-02228chr6:37876100-3787632000--
HS083-02229chr6:38607330-3860757000--
HS083-02230chr6:39082450-3908265000dbSUPER
HS083-02231chr6:41894400-4189465003--
HS083-02232chr6:42085710-4208764001GeneHancer;dbSUPER
HS083-02233chr6:42750220-4275193004dbSUPER
HS083-02234chr6:42847690-4284805000dbSUPER
HS083-02235chr6:42897460-4289834000dbSUPER
HS083-02236chr6:43063060-4306611002GeneHancer;dbSUPER;HEDD
HS083-02237chr6:43670310-4367173003GeneHancer;dbSUPER
HS083-02238chr6:43692520-4369359010GeneHancer;dbSUPER;HEDD
HS083-02239chr6:43931290-4393179000GeneHancer
HS083-02240chr6:43938520-4394190021GeneHancer;dbSUPER
HS083-02241chr6:43969990-4397041000dbSUPER
HS083-02242chr6:43977530-4398006014GeneHancer;dbSUPER;HEDD
HS083-02243chr6:44001430-4400402007GeneHancer;dbSUPER;HEDD
HS083-02244chr6:44008890-44012640014GeneHancer;dbSUPER;HEDD
HS083-02245chr6:44040430-4404138009dbSUPER;HEDD
HS083-02246chr6:44214930-4421588008dbSUPER
HS083-02247chr6:44355610-4435588000--
HS083-02248chr6:45345060-4534550000--
HS083-02249chr6:45574360-4557848006GeneHancer;dbSUPER;HEDD
HS083-02250chr6:48799820-4880066000--
HS083-02251chr6:50725070-5072561000--
HS083-02252chr6:50818030-5081855001GeneHancer
HS083-02253chr6:51631490-5163170000--
HS083-02254chr6:52368080-5236938000GeneHancer;dbSUPER
HS083-02255chr6:52369550-5236989000GeneHancer;dbSUPER
HS083-02256chr6:52536040-5253622000--
HS083-02257chr6:53502140-5350235000--
HS083-02258chr6:55962480-5596359004--
HS083-02259chr6:56955070-5695549000dbSUPER
HS083-02260chr6:57182500-5718274000--
HS083-02261chr6:58773490-58780300013GeneHancer;dbSUPER
HS083-02262chr6:64954960-6495518000--
HS083-02263chr6:71276710-7127686000--
HS083-02264chr6:74229780-7423072000dbSUPER
HS083-02265chr6:77112000-7711221000--
HS083-02266chr6:79943640-7994377000--
HS083-02267chr6:80099450-8009966000--
HS083-02268chr6:82054680-8205490000--
HS083-02269chr6:86302730-8630329000--
HS083-02270chr6:88182740-8818350000--
HS083-02271chr6:88836630-8883684001--
HS083-02272chr6:94357180-9435740000--
HS083-02273chr6:96969830-9697064004--
HS083-02274chr6:97345420-9734554000dbSUPER
HS083-02275chr6:99841590-9984194001--
HS083-02276chr6:99872990-9987309000dbSUPER
HS083-02277chr6:101946820-10194705000dbSUPER
HS083-02278chr6:104984530-10498473000--
HS083-02279chr6:107187070-10718757000GeneHancer;dbSUPER
HS083-02280chr6:108278660-10827908000dbSUPER
HS083-02281chr6:109702370-10970340012dbSUPER
HS083-02282chr6:109804170-10980430000dbSUPER
HS083-02283chr6:111872880-11187458007GeneHancer;dbSUPER
HS083-02284chr6:113701080-11370174000--
HS083-02285chr6:113952010-11395457003GeneHancer;dbSUPER
HS083-02286chr6:115936530-11593676000--
HS083-02287chr6:116892820-11689290000--
HS083-02288chr6:119029300-11903105008dbSUPER
HS083-02289chr6:119215690-11921678000dbSUPER
HS083-02290chr6:122720980-12272107000--
HS083-02291chr6:126361600-12636300000GeneHancer
HS083-02292chr6:128840780-12884140000dbSUPER
HS083-02293chr6:135035170-13503646004GeneHancer;dbSUPER
HS083-02294chr6:138407870-13840964002GeneHancer;dbSUPER
HS083-02295chr6:140439230-14043946000--
HS083-02296chr6:143047440-14304863003--
HS083-02297chr6:143265810-143266230012dbSUPER
HS083-02298chr6:143382200-14338250000dbSUPER
HS083-02299chr6:146887870-14688809000--
HS083-02300chr6:146899760-14689998000--
HS083-02301chr6:149968770-14996960000--
HS083-02302chr6:150175140-15017723006GeneHancer;dbSUPER
HS083-02303chr6:151710440-151712550013dbSUPER
HS083-02304chr6:157040620-15704314005GeneHancer;HEDD
HS083-02305chr6:158248100-15824865000--
HS083-02306chr6:158480850-15848251000GeneHancer;dbSUPER;HEDD
HS083-02307chr6:159065420-15906571001dbSUPER
HS083-02308chr6:159224460-15922481001GeneHancer;dbSUPER
HS083-02309chr6:159273340-15927620003GeneHancer;dbSUPER;HEDD
HS083-02310chr6:162431240-16243237001--
HS083-02311chr6:166702090-16670263001--
HS083-02312chr6:170532950-17053604003GeneHancer;HEDD
HS083-02313chr6:171025410-17102704004GeneHancer
HS083-02314chr6:171042060-17104349000--