EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

EnhancerAtlas 2.0 integrated enhancers from 12 high-throupghput technologies including P300, Histone, POLR2A, TF-binding, DHS, FAIRE, Mnase-seq, GRO-seq, STARR-seq, CAGE, CHIA-PET, and MPRA. Users could click any enhancer to view its detailed information.


HCC1954 | Homo sapiens

Cell type: Epithelial cell | Tissue: Mammary gland; breast/duct | Disease: TNM stage IIA, grade 3, ductal carcinoma.

Tissue/cell description report link(s): >>ExPASy and >>ATCC.

The tissue/cell type 'HCC1954' in Homo sapiens contains 2972 enhancers. Of these enhancers, 166 are associated with 221 SNPs. SNPs Enhancers

Show: chr11>>chr1>>chr2>>chr3>>chr4>>chr5>>chr6>>chr7>>chr8>>chr9>>chr10>>chr11>>chr12>>chr13>>chr14>>chr15>>chr16>>chr17>>chr18>>chr19>>chr20>>chr21>>chr22>>chrX>>chrY>>All


ID Coordinate SNPs TF binding sites Other Evidence
HS083-00378chr11:506470-50660000dbSUPER
HS083-00379chr11:954570-95559002GeneHancer;dbSUPER
HS083-00380chr11:1698380-169868001GeneHancer
HS083-00381chr11:1742480-174269000--
HS083-00382chr11:1783820-178502004dbSUPER
HS083-00383chr11:3012550-301348001dbSUPER
HS083-00384chr11:7596910-759731000GeneHancer;dbSUPER
HS083-00385chr11:8891600-889275000--
HS083-00386chr11:12107140-1210969004GeneHancer;dbSUPER;HEDD
HS083-00387chr11:12245050-1224621000GeneHancer;dbSUPER
HS083-00388chr11:12246370-1224690002GeneHancer;dbSUPER
HS083-00389chr11:12745540-1274707003GeneHancer
HS083-00390chr11:13354850-1335590012GeneHancer;dbSUPER
HS083-00391chr11:14051610-1405229012GeneHancer
HS083-00392chr11:14181900-1418243005--
HS083-00393chr11:14541280-1454184000dbSUPER
HS083-00394chr11:14912820-1491352001--
HS083-00395chr11:15371680-1537189000--
HS083-00396chr11:17229380-1723005002--
HS083-00397chr11:30221170-3022141000--
HS083-00398chr11:30988880-3098910000--
HS083-00399chr11:33711320-3371394001GeneHancer;dbSUPER;HEDD
HS083-00400chr11:34127340-3412758000dbSUPER
HS083-00401chr11:34284950-3428562000GeneHancer;dbSUPER
HS083-00402chr11:35103790-3510466001GeneHancer;dbSUPER;HEDD
HS083-00403chr11:35132440-3513475005GeneHancer;dbSUPER;HEDD
HS083-00404chr11:35914640-3591635001GeneHancer
HS083-00405chr11:35965700-3596625000dbSUPER
HS083-00406chr11:36372670-3637333000--
HS083-00407chr11:38005290-3800560000--
HS083-00408chr11:38363330-3836354000--
HS083-00409chr11:44999580-4500238013GeneHancer;dbSUPER
HS083-00410chr11:46264470-4626529006GeneHancer;dbSUPER
HS083-00411chr11:46360380-4636144001GeneHancer;dbSUPER
HS083-00412chr11:47537520-4753772000GeneHancer;dbSUPER
HS083-00413chr11:47663730-4766393000--
HS083-00414chr11:47787940-4778862000dbSUPER
HS083-00415chr11:50135160-5013595000--
HS083-00416chr11:51586120-5158757003--
HS083-00417chr11:51588170-5158968002--
HS083-00418chr11:55473320-5547352000--
HS083-00419chr11:57060100-5706058001GeneHancer;dbSUPER
HS083-00420chr11:57078030-5707916004dbSUPER
HS083-00421chr11:57544490-5754926004dbSUPER;HEDD
HS083-00422chr11:57668590-5767252008GeneHancer;dbSUPER;HEDD
HS083-00423chr11:58874770-5887491000dbSUPER
HS083-00424chr11:58940280-5894180007dbSUPER
HS083-00425chr11:59327810-5932868000GeneHancer;dbSUPER
HS083-00426chr11:59523110-5952398000dbSUPER
HS083-00427chr11:60681740-6068192000dbSUPER
HS083-00428chr11:60927330-6092886002dbSUPER
HS083-00429chr11:61464050-6146582008dbSUPER;HEDD
HS083-00430chr11:62266870-6226787000GeneHancer;dbSUPER;HEDD
HS083-00431chr11:62340840-6234130000dbSUPER
HS083-00432chr11:62388770-6238933000--
HS083-00433chr11:62420350-6242064000--
HS083-00434chr11:62538960-6253944003--
HS083-00435chr11:63449250-6345006004dbSUPER
HS083-00436chr11:63636700-6363776001GeneHancer;dbSUPER
HS083-00437chr11:64013020-6401388001dbSUPER
HS083-00438chr11:64073920-6407426000--
HS083-00439chr11:64078000-6407905000GeneHancer
HS083-00440chr11:64312070-6431309001--
HS083-00441chr11:64917420-6491924000GeneHancer;dbSUPER;HEDD
HS083-00442chr11:65029840-6502991000--
HS083-00443chr11:65101390-6510173000dbSUPER
HS083-00444chr11:65138250-6513912001GeneHancer;dbSUPER
HS083-00445chr11:65243880-6524570016dbSUPER;HEDD
HS083-00446chr11:65418640-6542082006GeneHancer;dbSUPER;HEDD
HS083-00447chr11:65429790-6543029013dbSUPER
HS083-00448chr11:66036160-6603634002--
HS083-00449chr11:66138910-6613903000--
HS083-00450chr11:66445050-6644523001--
HS083-00451chr11:66512390-6651314000--
HS083-00452chr11:66798690-6680027015GeneHancer;dbSUPER
HS083-00453chr11:66824510-6682460000dbSUPER
HS083-00454chr11:67151570-6715187000--
HS083-00455chr11:67188690-6718895003dbSUPER
HS083-00456chr11:67780930-6778276001dbSUPER;HEDD
HS083-00457chr11:68606090-6860824006dbSUPER
HS083-00458chr11:68889340-6889167002GeneHancer;dbSUPER
HS083-00459chr11:69040500-69043500013GeneHancer;dbSUPER
HS083-00460chr11:69044340-6904660007GeneHancer;dbSUPER;HEDD
HS083-00461chr11:69046750-6904984001GeneHancer;dbSUPER
HS083-00462chr11:69062040-6906269001dbSUPER
HS083-00463chr11:69064760-69070540013dbSUPER;HEDD
HS083-00464chr11:69166540-6916824005GeneHancer;dbSUPER
HS083-00465chr11:69196490-6919772008GeneHancer
HS083-00466chr11:69234400-6923600011GeneHancer;dbSUPER
HS083-00467chr11:69249040-69254750110GeneHancer;dbSUPER
HS083-00468chr11:69337870-6934042003GeneHancer
HS083-00469chr11:69456280-6945779035dbSUPER
HS083-00470chr11:69469240-6947044000GeneHancer;dbSUPER
HS083-00471chr11:69489320-6948995002dbSUPER
HS083-00472chr11:70005340-7000714023GeneHancer;HEDD
HS083-00473chr11:70049850-7005063001dbSUPER
HS083-00474chr11:70117020-7011786001dbSUPER
HS083-00475chr11:70245300-7024650001HEDD
HS083-00476chr11:72903620-7290784005GeneHancer;dbSUPER;HEDD
HS083-00477chr11:72962470-7296298000--
HS083-00478chr11:73463200-7346462002GeneHancer;HEDD
HS083-00479chr11:73499040-7350008005--
HS083-00480chr11:74203870-7420428001--
HS083-00481chr11:75052990-7505465004dbSUPER
HS083-00482chr11:77705450-7770563001--
HS083-00483chr11:78850380-7885096003--
HS083-00484chr11:85359130-8535968000--
HS083-00485chr11:85956390-8595686010dbSUPER
HS083-00486chr11:86453210-8645519003GeneHancer;dbSUPER;HEDD
HS083-00487chr11:86511690-8651196000dbSUPER
HS083-00488chr11:88070370-8807066000dbSUPER
HS083-00489chr11:88413610-8841383000GeneHancer
HS083-00490chr11:88850490-8885071000--
HS083-00491chr11:89668190-8966849000--
HS083-00492chr11:89955480-8995605001--
HS083-00493chr11:90536780-9053729000--
HS083-00494chr11:90957660-9095788000--
HS083-00495chr11:93394940-9339540000--
HS083-00496chr11:94258430-9426072001GeneHancer;dbSUPER;HEDD
HS083-00497chr11:94438530-9444277005GeneHancer;dbSUPER
HS083-00498chr11:94463880-9446473000GeneHancer;dbSUPER
HS083-00499chr11:94464770-9446667001GeneHancer;dbSUPER
HS083-00500chr11:94479300-9448437002GeneHancer;dbSUPER
HS083-00501chr11:94577880-9457918001GeneHancer
HS083-00502chr11:94823390-9482451000dbSUPER
HS083-00503chr11:94839680-9484221001GeneHancer;dbSUPER
HS083-00504chr11:94852300-9485472002GeneHancer;dbSUPER
HS083-00505chr11:94867450-9486866002GeneHancer;dbSUPER
HS083-00506chr11:95975510-9597735002GeneHancer;dbSUPER;HEDD
HS083-00507chr11:96039320-9604140000GeneHancer;dbSUPER;HEDD
HS083-00508chr11:98913910-9891414000--
HS083-00509chr11:99916740-9991696000--
HS083-00510chr11:102343640-10234535004GeneHancer;dbSUPER;HEDD
HS083-00511chr11:102346820-10234843002GeneHancer;dbSUPER
HS083-00512chr11:102415670-10241932007GeneHancer;dbSUPER;HEDD
HS083-00513chr11:102421580-10242556003GeneHancer;dbSUPER;HEDD
HS083-00514chr11:102980500-10298081010--
HS083-00515chr11:103855580-10385600000--
HS083-00516chr11:105754610-10575483000--
HS083-00517chr11:107752280-10775367001GeneHancer
HS083-00518chr11:109372940-10937333001--
HS083-00519chr11:112097250-11209753001dbSUPER
HS083-00520chr11:113746070-11374616000--
HS083-00521chr11:116544340-11654470000--
HS083-00522chr11:118429650-11842986001--
HS083-00523chr11:118791610-11879328004dbSUPER
HS083-00524chr11:119557030-11955799000GeneHancer;dbSUPER;HEDD
HS083-00525chr11:121284440-12128474000dbSUPER
HS083-00526chr11:121888000-12188855000--
HS083-00527chr11:123903850-12390406000--
HS083-00528chr11:127426090-12742639001--
HS083-00529chr11:133363590-13336380001--
HS083-00530chr11:133460070-13346030001--
HS083-00531chr11:133594590-13359482000--