EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

EnhancerAtlas 2.0 integrated enhancers from 12 high-throupghput technologies including P300, Histone, POLR2A, TF-binding, DHS, FAIRE, Mnase-seq, GRO-seq, STARR-seq, CAGE, CHIA-PET, and MPRA. Users could click any enhancer to view its detailed information.


HCC1954 | Homo sapiens

Cell type: Epithelial cell | Tissue: Mammary gland; breast/duct | Disease: TNM stage IIA, grade 3, ductal carcinoma.

Tissue/cell description report link(s): >>ExPASy and >>ATCC.

The tissue/cell type 'HCC1954' in Homo sapiens contains 2972 enhancers. Of these enhancers, 166 are associated with 221 SNPs. SNPs Enhancers

Show: chr7>>chr1>>chr2>>chr3>>chr4>>chr5>>chr6>>chr7>>chr8>>chr9>>chr10>>chr11>>chr12>>chr13>>chr14>>chr15>>chr16>>chr17>>chr18>>chr19>>chr20>>chr21>>chr22>>chrX>>chrY>>All


ID Coordinate SNPs TF binding sites Other Evidence
HS083-02315chr7:34410-3580002GeneHancer;HEDD
HS083-02316chr7:67580-7055003GeneHancer;HEDD
HS083-02317chr7:150130-15037000dbSUPER
HS083-02318chr7:385250-38555000--
HS083-02319chr7:1067660-106897015dbSUPER
HS083-02320chr7:1175700-117621000--
HS083-02321chr7:1570540-157316007dbSUPER;HEDD
HS083-02322chr7:1595120-159574002dbSUPER
HS083-02323chr7:2271890-227250001--
HS083-02324chr7:2288090-228944000GeneHancer;HEDD
HS083-02325chr7:5458180-545922000dbSUPER
HS083-02326chr7:6098330-609859001--
HS083-02327chr7:6120350-612155002--
HS083-02328chr7:6311640-631210000dbSUPER
HS083-02329chr7:6865270-686570001--
HS083-02330chr7:11219670-1122040001--
HS083-02331chr7:13957850-1395807000--
HS083-02332chr7:15229610-1522997004--
HS083-02333chr7:17263890-1726412000--
HS083-02334chr7:20837360-20838390011GeneHancer;dbSUPER;HEDD
HS083-02335chr7:22770750-2277102001GeneHancer;dbSUPER
HS083-02336chr7:23339230-2333934000--
HS083-02337chr7:25252880-2525351000--
HS083-02338chr7:26589400-2659004000GeneHancer
HS083-02339chr7:26903200-2690398002dbSUPER;HEDD
HS083-02340chr7:27150380-2715346005dbSUPER
HS083-02341chr7:27153470-2715562007dbSUPER
HS083-02342chr7:27780180-2778117002--
HS083-02343chr7:28973060-2897353001GeneHancer
HS083-02344chr7:29104310-2910453000--
HS083-02345chr7:29603990-2960438000dbSUPER
HS083-02346chr7:30027770-3002925003--
HS083-02347chr7:30204940-3020694001GeneHancer;dbSUPER;HEDD
HS083-02348chr7:30517930-3051822000dbSUPER
HS083-02349chr7:30590400-3059138002GeneHancer
HS083-02350chr7:30811170-3081167000dbSUPER
HS083-02351chr7:32930930-3293114000dbSUPER
HS083-02352chr7:33101780-3310217000--
HS083-02353chr7:35042620-3504422000GeneHancer;dbSUPER
HS083-02354chr7:39055320-3905576000--
HS083-02355chr7:42825670-4282588000--
HS083-02356chr7:43768660-4376902000--
HS083-02357chr7:44613340-4461343000--
HS083-02358chr7:44646250-4464704000dbSUPER
HS083-02359chr7:46017000-4601920003GeneHancer;dbSUPER
HS083-02360chr7:46969300-4697310004GeneHancer;dbSUPER
HS083-02361chr7:47008060-4701059006GeneHancer
HS083-02362chr7:47673480-47675980023GeneHancer;dbSUPER;HEDD
HS083-02363chr7:47708120-4771024012GeneHancer;dbSUPER;HEDD
HS083-02364chr7:47823010-4782658003GeneHancer;dbSUPER;HEDD
HS083-02365chr7:48129020-4812978001dbSUPER;HEDD
HS083-02366chr7:49897640-4989785002--
HS083-02367chr7:50517700-5051799000--
HS083-02368chr7:52226490-5222692000--
HS083-02369chr7:53312060-5331228000--
HS083-02370chr7:55132570-5513353002GeneHancer;dbSUPER;HEDD
HS083-02371chr7:55433920-5543440000--
HS083-02372chr7:55798850-5579906000--
HS083-02373chr7:55954900-5595555001--
HS083-02374chr7:56144820-5614534002--
HS083-02375chr7:61967010-61975730017GeneHancer;dbSUPER
HS083-02376chr7:64022910-6402330000--
HS083-02377chr7:64541220-6454197003GeneHancer
HS083-02378chr7:67873210-6787397000--
HS083-02379chr7:71211950-7121216000--
HS083-02380chr7:73152790-7315297000dbSUPER
HS083-02381chr7:73481740-7348204001GeneHancer
HS083-02382chr7:73726600-7372772013GeneHancer;dbSUPER
HS083-02383chr7:73893910-7389611001GeneHancer;dbSUPER
HS083-02384chr7:73993920-7399753002GeneHancer;dbSUPER
HS083-02385chr7:74072400-7407544009dbSUPER;HEDD
HS083-02386chr7:75071440-7507258001HEDD
HS083-02387chr7:75522450-7552299000GeneHancer
HS083-02388chr7:75544590-7554473001--
HS083-02389chr7:75585060-7558749002GeneHancer;dbSUPER;HEDD
HS083-02390chr7:75932390-7593311000dbSUPER
HS083-02391chr7:75933180-7593330003dbSUPER
HS083-02392chr7:76009030-7600994004GeneHancer;dbSUPER;HEDD
HS083-02393chr7:76091150-7609136001dbSUPER
HS083-02394chr7:77167420-7716823001dbSUPER
HS083-02395chr7:78685040-7868577001GeneHancer
HS083-02396chr7:81107680-8110846003GeneHancer
HS083-02397chr7:83019030-8301952000--
HS083-02398chr7:86782110-8678284003--
HS083-02399chr7:87920530-8792215001GeneHancer;dbSUPER;HEDD
HS083-02400chr7:87934280-8793610003dbSUPER
HS083-02401chr7:89671300-8967150000--
HS083-02402chr7:93823050-9382376000--
HS083-02403chr7:97714810-9771622002GeneHancer;HEDD
HS083-02404chr7:98028200-98030110019dbSUPER
HS083-02405chr7:99746600-9974696002--
HS083-02406chr7:101929780-101930660018dbSUPER;HEDD
HS083-02407chr7:102311640-10231199001--
HS083-02408chr7:103644580-10364479000--
HS083-02409chr7:103877020-10387723000--
HS083-02410chr7:104410150-10441036000--
HS083-02411chr7:105161630-10516249003--
HS083-02412chr7:105704860-10570694004GeneHancer;dbSUPER;HEDD
HS083-02413chr7:105751710-10575258002dbSUPER
HS083-02414chr7:107384620-10738484000dbSUPER
HS083-02415chr7:107531740-10753198000dbSUPER
HS083-02416chr7:108166320-10816647000dbSUPER
HS083-02417chr7:110656600-11065706000dbSUPER
HS083-02418chr7:112031280-11203236002GeneHancer
HS083-02419chr7:113300700-11330091000--
HS083-02420chr7:115850790-11585151001dbSUPER
HS083-02421chr7:116035150-11603590004GeneHancer;HEDD
HS083-02422chr7:116502700-11650306000dbSUPER
HS083-02423chr7:120590980-12059121004--
HS083-02424chr7:121035560-12103621012dbSUPER
HS083-02425chr7:122853320-12285372000--
HS083-02426chr7:128096080-12809676003dbSUPER
HS083-02427chr7:129251670-12925227000--
HS083-02428chr7:135194560-13519463000--
HS083-02429chr7:135347340-13534793001dbSUPER
HS083-02430chr7:135399390-13540034000GeneHancer
HS083-02431chr7:139045070-13904588000dbSUPER
HS083-02432chr7:139761840-13976232000dbSUPER
HS083-02433chr7:140178570-14017895000dbSUPER
HS083-02434chr7:140396640-14039671000--
HS083-02435chr7:141362650-14136397002GeneHancer;HEDD
HS083-02436chr7:143015350-14301684000GeneHancer;HEDD
HS083-02437chr7:143990890-14399147000--
HS083-02438chr7:144716540-14471745000--
HS083-02439chr7:147472240-14747261000--
HS083-02440chr7:148396590-14839755000--
HS083-02441chr7:148902620-14890367001GeneHancer;HEDD
HS083-02442chr7:149858670-14985888000--
HS083-02443chr7:151099910-15110125002GeneHancer;dbSUPER
HS083-02444chr7:151123760-151127050011GeneHancer
HS083-02445chr7:152325740-15232598000--
HS083-02446chr7:152372820-15237312001--
HS083-02447chr7:155089670-15508982000dbSUPER
HS083-02448chr7:156932030-15693220000--
HS083-02449chr7:158603940-15860528001GeneHancer;dbSUPER;HEDD
HS083-02450chr7:158621630-15862177000dbSUPER