EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

EnhancerAtlas 2.0 integrated enhancers from 12 high-throupghput technologies including P300, Histone, POLR2A, TF-binding, DHS, FAIRE, Mnase-seq, GRO-seq, STARR-seq, CAGE, CHIA-PET, and MPRA. Users could click any enhancer to view its detailed information.


HCC1954 | Homo sapiens

Cell type: Epithelial cell | Tissue: Mammary gland; breast/duct | Disease: TNM stage IIA, grade 3, ductal carcinoma.

Tissue/cell description report link(s): >>ExPASy and >>ATCC.

The tissue/cell type 'HCC1954' in Homo sapiens contains 2972 enhancers. Of these enhancers, 166 are associated with 221 SNPs. SNPs Enhancers

Show: chr8>>chr1>>chr2>>chr3>>chr4>>chr5>>chr6>>chr7>>chr8>>chr9>>chr10>>chr11>>chr12>>chr13>>chr14>>chr15>>chr16>>chr17>>chr18>>chr19>>chr20>>chr21>>chr22>>chrX>>chrY>>All


ID Coordinate SNPs TF binding sites Other Evidence
HS083-02451chr8:40000-4182004GeneHancer
HS083-02452chr8:5647820-564802001--
HS083-02453chr8:11725180-1172550000dbSUPER
HS083-02454chr8:13507510-1350772001--
HS083-02455chr8:15681840-1568206000--
HS083-02456chr8:15763310-1576353000--
HS083-02457chr8:20272200-2027242000--
HS083-02458chr8:26102180-2610263000--
HS083-02459chr8:29829130-2982961000GeneHancer
HS083-02460chr8:30013920-3001462003--
HS083-02461chr8:30514430-3051548003--
HS083-02462chr8:37931330-3793189000--
HS083-02463chr8:37931940-3793284001--
HS083-02464chr8:39020020-3902023000--
HS083-02465chr8:39243060-3924351001--
HS083-02466chr8:39798770-3980108005GeneHancer;dbSUPER;HEDD
HS083-02467chr8:40030190-4003084000GeneHancer;dbSUPER
HS083-02468chr8:40106470-4010670000--
HS083-02469chr8:40457410-4045867006GeneHancer
HS083-02470chr8:40958060-40960640013GeneHancer;HEDD
HS083-02471chr8:41012490-4101511001GeneHancer;dbSUPER
HS083-02472chr8:41386920-4138700001--
HS083-02473chr8:42064490-4206501004dbSUPER
HS083-02474chr8:42146660-4214767000GeneHancer;dbSUPER
HS083-02475chr8:42147790-4214920001GeneHancer;dbSUPER;HEDD
HS083-02476chr8:42249450-4225013000dbSUPER
HS083-02477chr8:42349170-4235167010dbSUPER
HS083-02478chr8:42911690-4291256001--
HS083-02479chr8:42995760-4299662001--
HS083-02480chr8:43092730-4309330000GeneHancer;dbSUPER
HS083-02481chr8:43820030-43838920048--
HS083-02482chr8:46838830-46857660134--
HS083-02483chr8:48173580-4817388000--
HS083-02484chr8:48921030-4892137001--
HS083-02485chr8:50449010-5044945001--
HS083-02486chr8:54605290-5460604001GeneHancer
HS083-02487chr8:54804880-5480510000dbSUPER
HS083-02488chr8:56901060-5690322002GeneHancer;dbSUPER
HS083-02489chr8:59465860-5946602000dbSUPER
HS083-02490chr8:59762400-5976340002GeneHancer;dbSUPER
HS083-02491chr8:61429810-6143033001dbSUPER
HS083-02492chr8:65026870-6502708003--
HS083-02493chr8:66303720-6630394000--
HS083-02494chr8:66422600-6642491007--
HS083-02495chr8:67025180-6702619000dbSUPER
HS083-02496chr8:67446360-6744799003GeneHancer;dbSUPER
HS083-02497chr8:68315500-6831597001--
HS083-02498chr8:69818250-6981894000--
HS083-02499chr8:70160290-7016067002--
HS083-02500chr8:73949870-7395019000--
HS083-02501chr8:74334940-7433629001GeneHancer
HS083-02502chr8:77277900-7727811000--
HS083-02503chr8:77911710-7791222000dbSUPER
HS083-02504chr8:81212220-8121450006GeneHancer;HEDD
HS083-02505chr8:81663390-8166666005GeneHancer
HS083-02506chr8:81785260-8178680005dbSUPER
HS083-02507chr8:83021150-8302136000--
HS083-02508chr8:87526770-8752726001--
HS083-02509chr8:92846540-9284715000--
HS083-02510chr8:93977220-9397773000--
HS083-02511chr8:94417760-9441810000GeneHancer
HS083-02512chr8:94886380-9488869003GeneHancer;dbSUPER
HS083-02513chr8:94946620-9494950001GeneHancer;dbSUPER;HEDD
HS083-02514chr8:95007740-9500796002--
HS083-02515chr8:95486530-9548722008--
HS083-02516chr8:95732240-9573289001--
HS083-02517chr8:95835790-9583613000--
HS083-02518chr8:95907200-9590740000--
HS083-02519chr8:96037430-9603797000--
HS083-02520chr8:96099080-9610092001GeneHancer;dbSUPER
HS083-02521chr8:96111350-9611484005GeneHancer;dbSUPER;HEDD
HS083-02522chr8:96122280-9612622001GeneHancer;dbSUPER;HEDD
HS083-02523chr8:96146260-9614734000dbSUPER;HEDD
HS083-02524chr8:96202630-9620645006GeneHancer;HEDD
HS083-02525chr8:96238600-9623904000GeneHancer;dbSUPER
HS083-02526chr8:96281120-9628126000--
HS083-02527chr8:96345150-9634548000--
HS083-02528chr8:97159240-9716007000GeneHancer
HS083-02529chr8:97247290-9724773000--
HS083-02530chr8:98630210-9863120003GeneHancer
HS083-02531chr8:98657120-9865763001--
HS083-02532chr8:98843170-9884432003GeneHancer;HEDD
HS083-02533chr8:98943750-9894500002GeneHancer;dbSUPER
HS083-02534chr8:99305520-9930623001--
HS083-02535chr8:100025580-10002598000--
HS083-02536chr8:100905320-10090586000--
HS083-02537chr8:101063620-10106455000--
HS083-02538chr8:101225660-10122604000--
HS083-02539chr8:101320950-10132209000dbSUPER
HS083-02540chr8:101426290-10143118006GeneHancer;dbSUPER;HEDD
HS083-02541chr8:101483070-10148663007GeneHancer;dbSUPER;HEDD
HS083-02542chr8:101801090-10180187001GeneHancer
HS083-02543chr8:101818700-10181988002GeneHancer;HEDD
HS083-02544chr8:101880040-10188265009GeneHancer;dbSUPER;HEDD
HS083-02545chr8:101912140-10191333001GeneHancer;dbSUPER;HEDD
HS083-02546chr8:101919140-10191996010GeneHancer;dbSUPER;HEDD
HS083-02547chr8:101962310-10196263000dbSUPER
HS083-02548chr8:102038280-10204027003GeneHancer;dbSUPER;HEDD
HS083-02549chr8:102138240-10213945000dbSUPER
HS083-02550chr8:102387070-102389530015GeneHancer;dbSUPER
HS083-02551chr8:102397880-10240200002GeneHancer;dbSUPER
HS083-02552chr8:102448350-10245168003GeneHancer;dbSUPER;HEDD
HS083-02553chr8:102461940-102468150110GeneHancer;dbSUPER;HEDD
HS083-02554chr8:102505020-102507640012dbSUPER;HEDD
HS083-02555chr8:102614040-102617370015GeneHancer;dbSUPER;HEDD
HS083-02556chr8:102816620-10281696005--
HS083-02557chr8:103643930-10364422000--
HS083-02558chr8:103697120-10369937000GeneHancer
HS083-02559chr8:103742920-10374417004GeneHancer;dbSUPER
HS083-02560chr8:103757050-10375836000GeneHancer;dbSUPER
HS083-02561chr8:103766120-10377165006GeneHancer;dbSUPER;HEDD
HS083-02562chr8:103799720-10380239016GeneHancer;dbSUPER
HS083-02563chr8:104311220-10431177000--
HS083-02564chr8:105559700-10556015001--
HS083-02565chr8:106392860-10639322000--
HS083-02566chr8:107218530-10721972000GeneHancer
HS083-02567chr8:107473540-10747432000GeneHancer
HS083-02568chr8:107511400-10751689014GeneHancer;dbSUPER
HS083-02569chr8:107618220-10762186004GeneHancer;dbSUPER;HEDD
HS083-02570chr8:107670410-10767156001--
HS083-02571chr8:107706650-10770729000--
HS083-02572chr8:108144060-10814526000--
HS083-02573chr8:108365440-10836740001--
HS083-02574chr8:109151610-10915232001GeneHancer
HS083-02575chr8:109260310-10926084000--
HS083-02576chr8:109455930-10945680002dbSUPER
HS083-02577chr8:111780390-11178073000--
HS083-02578chr8:111900380-11190079001--
HS083-02579chr8:115450440-11545066000--
HS083-02580chr8:117217020-11721749000--
HS083-02581chr8:117362630-11736386001GeneHancer
HS083-02582chr8:117464800-11746740002GeneHancer;dbSUPER
HS083-02583chr8:117571700-11757328001GeneHancer
HS083-02584chr8:117779030-11777942000--
HS083-02585chr8:118109730-11811025000--
HS083-02586chr8:118533290-11853363000--
HS083-02587chr8:118752700-11875298000--
HS083-02588chr8:118859150-11886171003GeneHancer;dbSUPER
HS083-02589chr8:118946010-11894789007GeneHancer;dbSUPER
HS083-02590chr8:118957940-11896147003GeneHancer;dbSUPER;HEDD
HS083-02591chr8:119002460-11900451001GeneHancer;dbSUPER
HS083-02592chr8:119004670-11900633001GeneHancer;dbSUPER
HS083-02593chr8:119012160-11901434002GeneHancer;dbSUPER
HS083-02594chr8:119022810-11902601004GeneHancer;dbSUPER;HEDD
HS083-02595chr8:119026560-11903326007GeneHancer;dbSUPER
HS083-02596chr8:119041360-119044960011GeneHancer;dbSUPER
HS083-02597chr8:119046380-11904771003GeneHancer;dbSUPER
HS083-02598chr8:119109720-11911262011GeneHancer;dbSUPER;HEDD
HS083-02599chr8:119153360-11915527001GeneHancer;dbSUPER
HS083-02600chr8:119232680-11923734005dbSUPER
HS083-02601chr8:119251720-11925399002GeneHancer;dbSUPER
HS083-02602chr8:119344500-11934669002GeneHancer;dbSUPER
HS083-02603chr8:119354970-11935713001GeneHancer;dbSUPER
HS083-02604chr8:119357200-11935842004GeneHancer;dbSUPER
HS083-02605chr8:119360650-11936383003dbSUPER
HS083-02606chr8:119518200-11951979003GeneHancer
HS083-02607chr8:119633430-11963377000--
HS083-02608chr8:119633900-11963404001--
HS083-02609chr8:120220840-12022229002dbSUPER
HS083-02610chr8:120262240-12026244000--
HS083-02611chr8:123579200-12358224002GeneHancer
HS083-02612chr8:124401430-12440166000--
HS083-02613chr8:124553040-12455313000dbSUPER
HS083-02614chr8:124608060-12461055037GeneHancer;HEDD
HS083-02615chr8:124868270-12486854000--
HS083-02616chr8:125211390-12521381009GeneHancer;dbSUPER
HS083-02617chr8:125314200-12531501000--
HS083-02618chr8:125383550-12538409001--
HS083-02619chr8:125791920-12579433001GeneHancer;dbSUPER;HEDD
HS083-02620chr8:125868110-12587060004GeneHancer;HEDD
HS083-02621chr8:126285660-12628654003GeneHancer;dbSUPER;HEDD
HS083-02622chr8:126422390-12642538007GeneHancer;dbSUPER
HS083-02623chr8:126539560-12654181020GeneHancer;HEDD
HS083-02624chr8:126556640-12655760000GeneHancer;dbSUPER
HS083-02625chr8:126568100-12656899001GeneHancer;dbSUPER
HS083-02626chr8:126605800-12660702002GeneHancer;dbSUPER;HEDD
HS083-02627chr8:126618360-12661894002GeneHancer;dbSUPER
HS083-02628chr8:127446150-12744760002GeneHancer;HEDD
HS083-02629chr8:127569730-12757027001dbSUPER
HS083-02630chr8:128050380-12805249005GeneHancer;dbSUPER
HS083-02631chr8:128519530-12852034003GeneHancer
HS083-02632chr8:128679130-12868368000GeneHancer;dbSUPER;HEDD
HS083-02633chr8:128811380-12881412011GeneHancer;dbSUPER
HS083-02634chr8:128821370-12882327001GeneHancer;dbSUPER
HS083-02635chr8:128843440-12884491002GeneHancer;dbSUPER
HS083-02636chr8:128863350-12886772006GeneHancer;dbSUPER
HS083-02637chr8:128871130-12887290004GeneHancer;dbSUPER
HS083-02638chr8:129036890-12903813000GeneHancer
HS083-02639chr8:129164520-12916674001GeneHancer;dbSUPER
HS083-02640chr8:129178950-12918234024GeneHancer;dbSUPER;HEDD
HS083-02641chr8:129187460-129190780111GeneHancer;dbSUPER
HS083-02642chr8:130507730-13050993000--
HS083-02643chr8:131370390-13137125008GeneHancer;dbSUPER
HS083-02644chr8:132242860-13224335000--
HS083-02645chr8:134224110-13422510000GeneHancer;dbSUPER
HS083-02646chr8:134583710-13458393000dbSUPER
HS083-02647chr8:135460950-13546117000--
HS083-02648chr8:135724380-13572508000dbSUPER
HS083-02649chr8:136847360-13684767000--
HS083-02650chr8:137050000-13705032000--
HS083-02651chr8:138149030-13814935001--
HS083-02652chr8:138622270-13862249001--
HS083-02653chr8:141467470-14146773000dbSUPER
HS083-02654chr8:144820920-14482202001dbSUPER
HS083-02655chr8:145010180-14501114000dbSUPER;HEDD
HS083-02656chr8:145011240-14501133000dbSUPER
HS083-02657chr8:145011410-14501178003dbSUPER
HS083-02658chr8:145447180-14544844001--
HS083-02659chr8:145653120-14565387000dbSUPER
HS083-02660chr8:145992940-14599382002GeneHancer;HEDD
HS083-02661chr8:146126310-14612678001--