EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

EnhancerAtlas 2.0 integrated enhancers from 12 high-throupghput technologies including P300, Histone, POLR2A, TF-binding, DHS, FAIRE, Mnase-seq, GRO-seq, STARR-seq, CAGE, CHIA-PET, and MPRA. Users could click any enhancer to view its detailed information.


HCC1954 | Homo sapiens

Cell type: Epithelial cell | Tissue: Mammary gland; breast/duct | Disease: TNM stage IIA, grade 3, ductal carcinoma.

Tissue/cell description report link(s): >>ExPASy and >>ATCC.

The tissue/cell type 'HCC1954' in Homo sapiens contains 2972 enhancers. Of these enhancers, 166 are associated with 221 SNPs. SNPs Enhancers

Show: chr22>>chr1>>chr2>>chr3>>chr4>>chr5>>chr6>>chr7>>chr8>>chr9>>chr10>>chr11>>chr12>>chr13>>chr14>>chr15>>chr16>>chr17>>chr18>>chr19>>chr20>>chr21>>chr22>>chrX>>chrY>>All


ID Coordinate SNPs TF binding sites Other Evidence
HS083-01657chr22:17003900-1700427000--
HS083-01658chr22:18111230-1811136000--
HS083-01659chr22:18716680-1871728000--
HS083-01660chr22:18797220-1879901004--
HS083-01661chr22:19279010-1927912000dbSUPER
HS083-01662chr22:19793650-1979418001GeneHancer
HS083-01663chr22:19842080-1984218000dbSUPER
HS083-01664chr22:19868670-1986960001GeneHancer;dbSUPER
HS083-01665chr22:19971920-1997236000GeneHancer;dbSUPER
HS083-01666chr22:20324720-2032536000--
HS083-01667chr22:20378140-2037842000--
HS083-01668chr22:20378740-2037888000--
HS083-01669chr22:20378960-20379300011--
HS083-01670chr22:20657990-2065843000--
HS083-01671chr22:20658700-2065918000--
HS083-01672chr22:20688000-2068889000--
HS083-01673chr22:20693120-2069360000--
HS083-01674chr22:20849310-2085004000dbSUPER
HS083-01675chr22:20884180-2088693001GeneHancer;dbSUPER;HEDD
HS083-01676chr22:20922920-2092452001GeneHancer;dbSUPER;HEDD
HS083-01677chr22:21057000-2105729000--
HS083-01678chr22:21057410-21057750011--
HS083-01679chr22:21272530-2127288000dbSUPER
HS083-01680chr22:21598450-2160024004--
HS083-01681chr22:21681260-2168227000--
HS083-01682chr22:21810920-2181145000GeneHancer
HS083-01683chr22:21822310-2182244000--
HS083-01684chr22:21822490-2182264001--
HS083-01685chr22:21822720-21823060011--
HS083-01686chr22:21871100-2187161002--
HS083-01687chr22:22020420-2202103002--
HS083-01688chr22:22089640-2208990000--
HS083-01689chr22:22623990-2262515001GeneHancer
HS083-01690chr22:22751720-2275272001GeneHancer;dbSUPER
HS083-01691chr22:23799930-2380228001GeneHancer
HS083-01692chr22:24129450-2412995002dbSUPER
HS083-01693chr22:24666950-2466802000--
HS083-01694chr22:24698350-2470068002GeneHancer
HS083-01695chr22:25000930-2500172000--
HS083-01696chr22:25549790-2555166000GeneHancer;dbSUPER
HS083-01697chr22:25796540-2579754000GeneHancer;dbSUPER;HEDD
HS083-01698chr22:29195290-2919628001dbSUPER
HS083-01699chr22:29214720-2921643001GeneHancer;dbSUPER;HEDD
HS083-01700chr22:30191380-3019634008GeneHancer;dbSUPER;HEDD
HS083-01701chr22:30693750-3069527002GeneHancer;dbSUPER;HEDD
HS083-01702chr22:31225640-3122716002GeneHancer;dbSUPER
HS083-01703chr22:32057100-32058970010dbSUPER
HS083-01704chr22:32340810-3234121001dbSUPER
HS083-01705chr22:34744950-3474516000--
HS083-01706chr22:34823520-3482449017--
HS083-01707chr22:36000130-3600191003GeneHancer;dbSUPER;HEDD
HS083-01708chr22:36725550-3673024001GeneHancer;dbSUPER;HEDD
HS083-01709chr22:36857730-3685880001GeneHancer;dbSUPER;HEDD
HS083-01710chr22:36860880-3686244001GeneHancer;dbSUPER
HS083-01711chr22:36876940-3687761002dbSUPER
HS083-01712chr22:37266580-3726736000GeneHancer
HS083-01713chr22:37427210-3743012002GeneHancer;dbSUPER;HEDD
HS083-01714chr22:38147960-3814988000dbSUPER;HEDD
HS083-01715chr22:38290510-3829215006GeneHancer;dbSUPER;HEDD
HS083-01716chr22:38430400-3843093001GeneHancer;dbSUPER
HS083-01717chr22:39636360-3963685002dbSUPER
HS083-01718chr22:39898440-3989856000dbSUPER
HS083-01719chr22:39928570-3992869000dbSUPER
HS083-01720chr22:40894300-4089555000GeneHancer;dbSUPER
HS083-01721chr22:41047000-4104952008GeneHancer;dbSUPER;HEDD
HS083-01722chr22:41347480-4134778001--
HS083-01723chr22:41840030-4184238005dbSUPER
HS083-01724chr22:42159660-4215987000--
HS083-01725chr22:42492810-4249301000--
HS083-01726chr22:42977730-4297793010--
HS083-01727chr22:43484950-4348528001--
HS083-01728chr22:43512610-4351281001--
HS083-01729chr22:45706060-4570620002dbSUPER
HS083-01730chr22:45932530-4593493001GeneHancer;dbSUPER
HS083-01731chr22:46138070-4614101001GeneHancer;dbSUPER;HEDD
HS083-01732chr22:46431410-46432560017GeneHancer;dbSUPER
HS083-01733chr22:46462460-46468830011dbSUPER;HEDD
HS083-01734chr22:46770460-4677158001GeneHancer;dbSUPER;HEDD
HS083-01735chr22:50963620-5096387000dbSUPER