EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

EnhancerAtlas 2.0 integrated enhancers from 12 high-throupghput technologies including P300, Histone, POLR2A, TF-binding, DHS, FAIRE, Mnase-seq, GRO-seq, STARR-seq, CAGE, CHIA-PET, and MPRA. Users could click any enhancer to view its detailed information.


HCC1954 | Homo sapiens

Cell type: Epithelial cell | Tissue: Mammary gland; breast/duct | Disease: TNM stage IIA, grade 3, ductal carcinoma.

Tissue/cell description report link(s): >>ExPASy and >>ATCC.

The tissue/cell type 'HCC1954' in Homo sapiens contains 2972 enhancers. Of these enhancers, 166 are associated with 221 SNPs. SNPs Enhancers

Show: chr18>>chr1>>chr2>>chr3>>chr4>>chr5>>chr6>>chr7>>chr8>>chr9>>chr10>>chr11>>chr12>>chr13>>chr14>>chr15>>chr16>>chr17>>chr18>>chr19>>chr20>>chr21>>chr22>>chrX>>chrY>>All


ID Coordinate SNPs TF binding sites Other Evidence
HS083-01140chr18:158720-15903001--
HS083-01141chr18:267790-26796000--
HS083-01142chr18:837530-83773000--
HS083-01143chr18:3044560-304615003GeneHancer;dbSUPER
HS083-01144chr18:3622370-362634004GeneHancer;dbSUPER;HEDD
HS083-01145chr18:5294630-529565000dbSUPER
HS083-01146chr18:7946330-794719000GeneHancer
HS083-01147chr18:8704660-870581000dbSUPER
HS083-01148chr18:8800020-880129011GeneHancer;dbSUPER
HS083-01149chr18:9808330-980982001GeneHancer;dbSUPER
HS083-01150chr18:9914330-991537002dbSUPER
HS083-01151chr18:11859160-1186025001dbSUPER;HEDD
HS083-01152chr18:11945810-1194798002GeneHancer;HEDD
HS083-01153chr18:12376400-1237696003--
HS083-01154chr18:12408010-1240843000--
HS083-01155chr18:12446150-1244646002--
HS083-01156chr18:12883360-1288407001dbSUPER
HS083-01157chr18:12948230-1294886002--
HS083-01158chr18:18512670-18520490012GeneHancer
HS083-01159chr18:19192400-1919279000dbSUPER
HS083-01160chr18:20121710-2012384000GeneHancer;dbSUPER
HS083-01161chr18:20139330-2014012001GeneHancer;dbSUPER
HS083-01162chr18:21165100-2116625010dbSUPER
HS083-01163chr18:23669900-2367046002dbSUPER
HS083-01164chr18:28070480-2807086000--
HS083-01165chr18:28338220-2833888000--
HS083-01166chr18:29078260-2907884000dbSUPER
HS083-01167chr18:30234440-3023465000--
HS083-01168chr18:31415300-3141550001--
HS083-01169chr18:31754880-3175509000--
HS083-01170chr18:32821070-3282144001--
HS083-01171chr18:33077130-3307768000dbSUPER
HS083-01172chr18:33888500-3389042005GeneHancer;dbSUPER
HS083-01173chr18:36772150-3677294000--
HS083-01174chr18:38870470-3887067000--
HS083-01175chr18:56900840-5690119001--
HS083-01176chr18:58625770-5862597000--
HS083-01177chr18:59637340-5963837000--
HS083-01178chr18:61144280-6114484000dbSUPER
HS083-01179chr18:62534640-6253485000--
HS083-01180chr18:65877260-6587770001--
HS083-01181chr18:73701830-7370204000--
HS083-01182chr18:74812750-7481488000GeneHancer;dbSUPER;HEDD
HS083-01183chr18:75999610-7599981000--
HS083-01184chr18:76035700-7603639000--