EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

EnhancerAtlas 2.0 integrated enhancers from 12 high-throupghput technologies including P300, Histone, POLR2A, TF-binding, DHS, FAIRE, Mnase-seq, GRO-seq, STARR-seq, CAGE, CHIA-PET, and MPRA. Users could click any enhancer to view its detailed information.


HCC1954 | Homo sapiens

Cell type: Epithelial cell | Tissue: Mammary gland; breast/duct | Disease: TNM stage IIA, grade 3, ductal carcinoma.

Tissue/cell description report link(s): >>ExPASy and >>ATCC.

The tissue/cell type 'HCC1954' in Homo sapiens contains 2972 enhancers. Of these enhancers, 166 are associated with 221 SNPs. SNPs Enhancers

Show: chr14>>chr1>>chr2>>chr3>>chr4>>chr5>>chr6>>chr7>>chr8>>chr9>>chr10>>chr11>>chr12>>chr13>>chr14>>chr15>>chr16>>chr17>>chr18>>chr19>>chr20>>chr21>>chr22>>chrX>>chrY>>All


ID Coordinate SNPs TF binding sites Other Evidence
HS083-00666chr14:21736980-2173745001dbSUPER
HS083-00667chr14:21978830-2197926000--
HS083-00668chr14:23082240-2308420000GeneHancer;dbSUPER
HS083-00669chr14:23221460-2322173000--
HS083-00670chr14:23770070-2377050000dbSUPER
HS083-00671chr14:24609830-2461009001--
HS083-00672chr14:24610180-2461031000--
HS083-00673chr14:24610530-2461064000--
HS083-00674chr14:31925930-3192648001--
HS083-00675chr14:34407050-3440832003GeneHancer
HS083-00676chr14:34819040-3481970000--
HS083-00677chr14:34930240-3493130000--
HS083-00678chr14:35024450-3502598001GeneHancer;dbSUPER
HS083-00679chr14:35342200-3534369000dbSUPER
HS083-00680chr14:35800660-3580314004GeneHancer;dbSUPER;HEDD
HS083-00681chr14:35804420-35807370010GeneHancer;dbSUPER;HEDD
HS083-00682chr14:36295860-3629635002--
HS083-00683chr14:37078050-3707826000--
HS083-00684chr14:39583680-3958374000--
HS083-00685chr14:42035570-4203578000--
HS083-00686chr14:42274790-4227501001--
HS083-00687chr14:44898580-4489879000--
HS083-00688chr14:45366770-4536718006--
HS083-00689chr14:45553450-4555361000--
HS083-00690chr14:48800160-4880086000--
HS083-00691chr14:48807680-4880790000--
HS083-00692chr14:50052780-5005300000--
HS083-00693chr14:50065920-5006631000--
HS083-00694chr14:50319280-5031941000dbSUPER
HS083-00695chr14:50359880-5035997000dbSUPER
HS083-00696chr14:53257760-5325814001--
HS083-00697chr14:54907390-5490796000--
HS083-00698chr14:55569020-5557173006GeneHancer;dbSUPER;HEDD
HS083-00699chr14:55920400-5592191000GeneHancer
HS083-00700chr14:58087320-5808753000--
HS083-00701chr14:58711660-5871266004dbSUPER
HS083-00702chr14:59655490-5965609000dbSUPER
HS083-00703chr14:60215830-6021648001dbSUPER
HS083-00704chr14:60216700-6021742000dbSUPER
HS083-00705chr14:60559140-6055968000dbSUPER
HS083-00706chr14:60631790-6063189000dbSUPER
HS083-00707chr14:61990070-6199500005GeneHancer;dbSUPER
HS083-00708chr14:63343650-6334388000--
HS083-00709chr14:64331330-6433239003GeneHancer;dbSUPER
HS083-00710chr14:65381250-6538155000--
HS083-00711chr14:67708250-6770911000dbSUPER
HS083-00712chr14:69042610-6904468004GeneHancer;dbSUPER
HS083-00713chr14:69141470-6914483006GeneHancer;dbSUPER
HS083-00714chr14:69419140-6942033002GeneHancer;dbSUPER
HS083-00715chr14:69744570-6974479000--
HS083-00716chr14:71067150-7106733000--
HS083-00717chr14:71221400-7122355001GeneHancer;dbSUPER
HS083-00718chr14:71787750-7178881000dbSUPER
HS083-00719chr14:73393250-7339464001--
HS083-00720chr14:73395580-7339733000--
HS083-00721chr14:73450500-7345073000--
HS083-00722chr14:73924810-7392519000dbSUPER
HS083-00723chr14:74207810-7420902012GeneHancer;dbSUPER
HS083-00724chr14:74210780-7421192000GeneHancer;dbSUPER
HS083-00725chr14:74318820-7431941000--
HS083-00726chr14:75029370-7503118002GeneHancer;dbSUPER;HEDD
HS083-00727chr14:75642650-7564305001dbSUPER
HS083-00728chr14:75725360-7572616003dbSUPER
HS083-00729chr14:77278880-7727910000--
HS083-00730chr14:77383990-7738642003GeneHancer;dbSUPER;HEDD
HS083-00731chr14:77564700-7756498003dbSUPER
HS083-00732chr14:79847020-7984725010--
HS083-00733chr14:83141830-8314238000--
HS083-00734chr14:84608020-8460824000--
HS083-00735chr14:88712320-8871254000--
HS083-00736chr14:91883900-9188397000dbSUPER
HS083-00737chr14:92338880-9234128006GeneHancer;dbSUPER;HEDD
HS083-00738chr14:98254060-9825442000--
HS083-00739chr14:98443640-9844431001dbSUPER
HS083-00740chr14:99285410-9928686001GeneHancer
HS083-00741chr14:101012450-10101283008dbSUPER
HS083-00742chr14:101158720-10116009012GeneHancer;dbSUPER
HS083-00743chr14:102553070-10255332000dbSUPER
HS083-00744chr14:103593970-10359607001dbSUPER
HS083-00745chr14:104006410-10400813030GeneHancer;dbSUPER
HS083-00746chr14:104160690-10416089000GeneHancer;dbSUPER
HS083-00747chr14:105267080-10526751001dbSUPER
HS083-00748chr14:105294720-10529503001--
HS083-00749chr14:105560550-10556088001dbSUPER
HS083-00750chr14:105647270-10564746004--