Tag | Content |
---|
EnhancerAtlas ID | HS083-01533 |
Organism | Homo sapiens |
Tissue/cell | HCC1954 |
Coordinate | chr20:30180890-30183080 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
CTCF | MA0139.1 | chr20:30181278-30181297 | CGCCGCCCCCTGGTGACTG | - | 6.36 | FOSL1 | MA0477.1 | chr20:30181110-30181121 | CATGAGTCACC | - | 6.62 | JUND | MA0491.1 | chr20:30181110-30181121 | CATGAGTCACC | - | 6.02 | Zfx | MA0146.2 | chr20:30180946-30180960 | CCCGCCTCGGCCTC | + | 6.01 |
|
| Number of super-enhancer constituents: 37 | ID | Coordinate | Tissue/cell |
SE_02970 | chr20:30181389-30181892 | Bladder | SE_02970 | chr20:30181992-30185401 | Bladder | SE_23092 | chr20:30180932-30185504 | Colon_Crypt_1 | SE_23905 | chr20:30180954-30181864 | Colon_Crypt_2 | SE_23905 | chr20:30182067-30184386 | Colon_Crypt_2 | SE_24856 | chr20:30180918-30182002 | Colon_Crypt_3 | SE_24856 | chr20:30182053-30184543 | Colon_Crypt_3 | SE_27857 | chr20:30180854-30185380 | Fetal_Intestine | SE_28873 | chr20:30180831-30185610 | Fetal_Intestine_Large | SE_31829 | chr20:30180412-30185861 | Gastric | SE_33158 | chr20:30181452-30181850 | H1 | SE_33158 | chr20:30182756-30183557 | H1 | SE_33920 | chr20:30180844-30185589 | HCC1954 | SE_34238 | chr20:30180059-30185985 | HCT-116 | SE_34774 | chr20:30178236-30186156 | HeLa | SE_35318 | chr20:30180823-30185856 | HepG2 | SE_38269 | chr20:30180858-30184814 | HUVEC | SE_41187 | chr20:30180928-30185594 | Left_Ventricle | SE_42444 | chr20:30180946-30185866 | Lung | SE_44319 | chr20:30181009-30181986 | NHDF-Ad | SE_44319 | chr20:30182026-30185793 | NHDF-Ad | SE_44941 | chr20:30181086-30185438 | NHLF | SE_47160 | chr20:30178251-30187234 | Panc1 | SE_48882 | chr20:30181003-30181958 | Right_Atrium | SE_48882 | chr20:30181969-30185515 | Right_Atrium | SE_50279 | chr20:30180885-30185736 | Sigmoid_Colon | SE_52484 | chr20:30180829-30185715 | Small_Intestine | SE_54437 | chr20:30181089-30181806 | Spleen | SE_54437 | chr20:30182461-30185240 | Spleen | SE_55719 | chr20:30180277-30185711 | u87 | SE_57184 | chr20:30181330-30184438 | VACO_400 | SE_57391 | chr20:30181275-30181985 | VACO_503 | SE_64122 | chr20:30180984-30181864 | HSMM | SE_64122 | chr20:30182475-30185373 | HSMM | SE_67492 | chr20:30180277-30185711 | u87 | SE_68887 | chr20:30181002-30181975 | H9 | SE_68887 | chr20:30182050-30185155 | H9 |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| Number: 1 | ID | Chromosome | Start | End |
GH20I031590 | chr20 | 30178404 | 30186899 |
|
Enhancer Sequence | GACGGGGTTT CACCATGCTA GCCAGGATGG TCTTGATCTC CTGACGTCGT GATCCGCCCG 60 CCTCGGCCTC CCAAAGTGCT GGGATTACAG GCATGAGCCA CTGCACCCGG CCTTTTTTTG 120 TATTTTCAGT AGAGACAGAG TTTCACCATG TTGGCCAGGC TGGTCTTGAA CTCCTGAACT 180 CAAAGCCTGC CTTGGCCTCC CAAAATGCTG GGATCACAGG CATGAGTCAC CGCACCTGGC 240 CTATAGCTTC CTTTTAAACA GCACATCGTT GCTTTTGCAT CAGCCAGAAA AAAAAAATAC 300 TTTTTAGAAG AAAACGTACA TTATCATGAG TCATAGTATT TGAGGAGTAC AGCTCTGAAG 360 CGGCCTGAGG TGAGGGTGCA GCTGGAGGCG CCGCCCCCTG GTGACTGGGT ACTCAGGGTT 420 GGGTTGAGCC AGGAGGGTGG TGGTTGCCTC AGGCTCTGTG AGGTGGGCAG GGAGCTGGGC 480 AGGGAGCTGG GCGGGGTCCT GAGACATTCA ACCTCAGCTG GTTCCTGGGT TCCGGGCCCT 540 GGAGCAGTGA GGGAAGCCAG TTATATGGGA GGCAGGTGAG TCAAAGGAGG GTCAGGCTGG 600 GTGCCAGAGA GGAGGGCCAC TGCTTCTGTG AGGGGGCCTC TGGGGCCTTC CGTCCATCAC 660 CCAGTGGGCA TATGGGGACA CCACCGAGGC CCAGAGACCT CTTGCCCAGT CTCCCCACTC 720 TCACCTCAGA GGTCCTTGCA GCTAGGGGCA GTGGCCTCTG CTGAGCTTTG CCCAGGGTGT 780 AGCCAGTTGG CCTCAGGGCA CTCCTGACTG GTGGCATGAG CCTCCCAGGC TGCCAGGGTC 840 AGGTCAGCTC CCACGCCTCC ACCCTGGGCA GGGCCCAGGC CTGCATTCAT GGGTGCAAGA 900 GGAGAGAGAG GCCTGAGCCC TGGATGGGTG TGGTTGTGTG TCCTTGGGGC TGATGCAGGA 960 TTTTTTTTTT TTTTTTGAGA CGATGTCTTG CTCTGTTGCC CAGGCTGCAG TGCAGTGGCA 1020 CGATCTCGTC TCACTGCAAC CTCCATCTCC TGGGTTCAAG CAATTATCCT GCCTCAGCCT 1080 CCCGAGCAGA TGGAGTTACA GGCGTGCACC ACCACGCCTG GCTAATTTTC GTATTTTTAG 1140 TAGAGAGGGA GTTTCACCAT GTGGGCCAGG CTGGTCTCGA ACTTCCGACC TCATATAATC 1200 TGCCTGCCTT GGCCTCCCAA AGTGCCGGGA TTACAGGCGT GAGCCACCGC ACCTGGCCTT 1260 TCTGCAGGAT TCTGAATTGT GTATGTGTGG AGAGTAAGGG GACTGTGTGC TCTAGAAGGG 1320 CTGTGGTGGG AGGTCTCTGG CCTGGTGCAG GTGGGTGTTG GTTGGGTCTG TGCACTGTGG 1380 GAGTGGGTGC CTGCAGGAAG CCAGTTTATC CTTTTGCAGG CAGTGGACTT CTCTAAGGCT 1440 GCGGGCATGT GTGTTGGCAT CTTGGAGTCC CAGGTGTTTT GGCGTGAGTA ATACTGTATA 1500 GATGTAAGTG TGTGTAGTGT TTGCAATGTT GTAGTGTGGG TGCATGTGTC TGTGTGTCCT 1560 GTTTGTTGAG AGGATTCATT GCATGTGGTT CTGTTAGGAG TGATAATGGG GTGTTTTGAG 1620 ACATTTCCTC CTTGGTCTCT ATTTTTTGGT GTGTTGGTTA TGCAGATTTG GTGTTTCGGT 1680 AGTGTGCGCG GAGGTCAGTG TGTTGGTTGT ATATTATGGT GTACTGTTGT GCGTTGTGCA 1740 TTTGGCAGGT TGTGTCTATT GGTGTGTGGC TGTTGGGTTT GTCTGTTGTG TCAGTCGTAC 1800 ATATAAATGC CACGTTGGGC GTGTGGGTGT GTGCATTTGT ATATTGCTCT GTGGGTGTGC 1860 GAAGCAGTGT GTTTGTGTAA CCCTGCAGGT TTGGCCTATG CTGAGTAACC TAAGATGGGA 1920 GCTCCCTGAG CCTTGGCTCT GCCCTTGCCT TTGGCTGCTG GAGACCCTGG GCAGCAATGG 1980 CCCTTTGTCC AGCCACAGGA AAACCCCACC CCCCTCCATC GGCAGGGGAC TTGGGAGGGG 2040 CCCAGACTGG TAGGCTCCAG CCTCCCGTCC ATTGTTCTGG GGCCTCTCTG GAAAACAGGA 2100 TGGGAGGTGA AAGGTGGACA CAGGCCTGGA CCCCCACACT CCCTGAAACA ACCCAGGGGC 2160 ACAGCACAGA ATCCTTAGGA GGGAGGGCCT 2190
|