EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

EnhancerAtlas 2.0 integrated enhancers from 12 high-throupghput technologies including P300, Histone, POLR2A, TF-binding, DHS, FAIRE, Mnase-seq, GRO-seq, STARR-seq, CAGE, CHIA-PET, and MPRA. Users could click any enhancer to view its detailed information.


HCC1954 | Homo sapiens

Cell type: Epithelial cell | Tissue: Mammary gland; breast/duct | Disease: TNM stage IIA, grade 3, ductal carcinoma.

Tissue/cell description report link(s): >>ExPASy and >>ATCC.

The tissue/cell type 'HCC1954' in Homo sapiens contains 2972 enhancers. Of these enhancers, 166 are associated with 221 SNPs. SNPs Enhancers

Show: chr15>>chr1>>chr2>>chr3>>chr4>>chr5>>chr6>>chr7>>chr8>>chr9>>chr10>>chr11>>chr12>>chr13>>chr14>>chr15>>chr16>>chr17>>chr18>>chr19>>chr20>>chr21>>chr22>>chrX>>chrY>>All


ID Coordinate SNPs TF binding sites Other Evidence
HS083-00751chr15:20530990-2053184001--
HS083-00752chr15:20557900-2055980002GeneHancer
HS083-00753chr15:23033410-2303412000--
HS083-00754chr15:23085880-2308623000--
HS083-00755chr15:26327160-2632802001GeneHancer
HS083-00756chr15:27462280-2746250000--
HS083-00757chr15:35279880-3528031001--
HS083-00758chr15:37911260-3791147000--
HS083-00759chr15:39655240-3965624002GeneHancer;dbSUPER
HS083-00760chr15:39813930-3981414000--
HS083-00761chr15:40632220-4063300001dbSUPER
HS083-00762chr15:40803600-4080428000GeneHancer
HS083-00763chr15:40886590-4088681000--
HS083-00764chr15:41137620-4113875000dbSUPER;HEDD
HS083-00765chr15:41158000-4115882002GeneHancer;dbSUPER
HS083-00766chr15:43029050-4302921001--
HS083-00767chr15:44954920-4495558000dbSUPER
HS083-00768chr15:50381040-5038126000GeneHancer;dbSUPER
HS083-00769chr15:50978210-5097872001--
HS083-00770chr15:51056700-5105766016dbSUPER
HS083-00771chr15:51176100-5117682006GeneHancer;dbSUPER
HS083-00772chr15:52122030-5212308002dbSUPER
HS083-00773chr15:52311570-5231352002dbSUPER
HS083-00774chr15:52587280-5258780000--
HS083-00775chr15:55488840-5548900000--
HS083-00776chr15:56805850-5680605000--
HS083-00777chr15:57298660-5729886000--
HS083-00778chr15:58622500-5862679005GeneHancer;dbSUPER
HS083-00779chr15:58731560-5873472008GeneHancer;dbSUPER
HS083-00780chr15:58759330-5876246003GeneHancer;dbSUPER;HEDD
HS083-00781chr15:59041490-5904167000--
HS083-00782chr15:59882920-5988322000GeneHancer;dbSUPER
HS083-00783chr15:60689540-6068996002dbSUPER
HS083-00784chr15:60818220-6081890010GeneHancer;dbSUPER;HEDD
HS083-00785chr15:62352180-6235247000--
HS083-00786chr15:63189360-6318994000GeneHancer;dbSUPER
HS083-00787chr15:64875290-6487559000GeneHancer;dbSUPER
HS083-00788chr15:67340270-6734289007GeneHancer;dbSUPER;HEDD
HS083-00789chr15:67397870-6739939002GeneHancer;dbSUPER
HS083-00790chr15:68692790-6869320000--
HS083-00791chr15:69745360-6974574001dbSUPER
HS083-00792chr15:70486850-70490280011GeneHancer;dbSUPER
HS083-00793chr15:70766290-7076840002GeneHancer;dbSUPER
HS083-00794chr15:70800270-7080260006GeneHancer;dbSUPER
HS083-00795chr15:71586280-7158796000GeneHancer;dbSUPER
HS083-00796chr15:71588090-7158943000GeneHancer;dbSUPER
HS083-00797chr15:72460180-7246083000GeneHancer;dbSUPER
HS083-00798chr15:72462280-7246364001GeneHancer;dbSUPER;HEDD
HS083-00799chr15:72476010-7247745000GeneHancer;dbSUPER
HS083-00800chr15:73427040-7342724000--
HS083-00801chr15:75165250-7516553000dbSUPER
HS083-00802chr15:75229590-7523025000--
HS083-00803chr15:75660540-7566082001--
HS083-00804chr15:75742700-7574370007dbSUPER
HS083-00805chr15:75955460-7595735006GeneHancer;dbSUPER;HEDD
HS083-00806chr15:75958740-7595939000GeneHancer;dbSUPER
HS083-00807chr15:77197440-7719815003--
HS083-00808chr15:77363160-7736323000dbSUPER
HS083-00809chr15:77798530-7780106010GeneHancer;dbSUPER
HS083-00810chr15:78441770-7844227000dbSUPER
HS083-00811chr15:85886540-85887780010GeneHancer
HS083-00812chr15:87517050-8751735000--
HS083-00813chr15:89877590-8987790001--
HS083-00814chr15:89921400-8992202012GeneHancer
HS083-00815chr15:90378880-9038084014GeneHancer;dbSUPER
HS083-00816chr15:90380960-9038184000GeneHancer;dbSUPER;HEDD
HS083-00817chr15:90703100-9070705003GeneHancer;dbSUPER;HEDD
HS083-00818chr15:90707880-9071008003GeneHancer;dbSUPER;HEDD
HS083-00819chr15:90754130-9075620010GeneHancer;dbSUPER;HEDD
HS083-00820chr15:91208690-9120930000GeneHancer;dbSUPER
HS083-00821chr15:93361780-9336578005dbSUPER;HEDD
HS083-00822chr15:93374280-9337628001GeneHancer;dbSUPER
HS083-00823chr15:93447710-9344874019dbSUPER
HS083-00824chr15:96775540-9677643001GeneHancer
HS083-00825chr15:101252090-10125678001GeneHancer;dbSUPER
HS083-00826chr15:101262320-10126450003GeneHancer;dbSUPER
HS083-00827chr15:101834530-10183530001--
HS083-00828chr15:102192340-10219247000dbSUPER