| Tag | Content |
|---|
EnhancerAtlas ID | HS083-01329 |
Organism | Homo sapiens |
Tissue/cell | HCC1954 |
Coordinate | chr19:56602380-56604230 |
Target genes | |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| IRF1 | MA0050.2 | chr19:56603317-56603338 | AAGCCGAAACCGAAACCGAAG | - | 6.33 | | IRF8 | MA0652.1 | chr19:56603320-56603334 | CCGAAACCGAAACC | + | 7.64 | | IRF9 | MA0653.1 | chr19:56603325-56603340 | ACCGAAACCGAAGCC | + | 6.3 | | IRF9 | MA0653.1 | chr19:56603319-56603334 | GCCGAAACCGAAACC | + | 6.67 | | LMX1B | MA0703.2 | chr19:56602633-56602644 | TTAATTAAAAT | - | 6.62 | | SOX10 | MA0442.2 | chr19:56602647-56602658 | TGCTTTGTTTT | - | 6.02 | | TFAP2C | MA0524.2 | chr19:56602522-56602534 | TGCCCCGGGGCA | + | 6.74 | | TFAP2C | MA0524.2 | chr19:56602522-56602534 | TGCCCCGGGGCA | - | 6.74 |
|
| | Number of super-enhancer constituents: 4 | ID | Coordinate | Tissue/cell |
| SE_41593 | chr19:56602510-56603919 | LNCaP | | SE_41593 | chr19:56603959-56605136 | LNCaP | | SE_53594 | chr19:56602501-56603939 | Spleen | | SE_69016 | chr19:56602937-56603793 | H9 |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH19I056089 | chr19 | 56601262 | 56604657 |
|
Enhancer Sequence | GGTGAAGTCA GGAAGGGGGG AGCCTTCTGG AGAGATGGCA TGGAGCCCAC TGCGTTGTCA 60
ACATAAATCA AAAAATGTTG TAAGTTATAA GCACATTACT TAAAGATGTA GAGAGAATTA 120
AAAACAAACA TCAGAAGCTA TTTGCCCCGG GGCAGTGTGA CTGAAGGGGA CAGAAAGGGA 180
CGGGCAGGAA AGAGATTTGT TGTCACCGTA AACCGAGCCA TACTATCTGA ACCTTACAAG 240
TGCTTCTACG CCTTTAATTA AAATAACTGC TTTGTTTTCG AAGCTGTGAA GAAAGAAAGT 300
GTAGCAATGC TCCCTGTGAC TCAGCTATGA ATAGCATTTA TTCATGACGA CATGAATTCT 360
GAACACAAAA CTTGTGACAC AGTGGCAGCT AAGACAGGGG CACTGGGGCG GGTGTGCAGT 420
ACGTGGAGAG CGCAGTGAGT GGAGAGTGGG GAGAGGATGT GGGAGCCATG TCCTCACCTC 480
CCATTAGATT TGCAACTATC AAAGCAATTT CATGAGCTCT TTACCTAGAA CCAGGGAGAA 540
CCCCAAAGAG TGCATGGAGG GGCTCCTTCC TCTAGAGGCA AACTGGGAGT GGGGAAGGCA 600
GGAGGTGGGA GCTGTTTTCT GCTTTAGGCC GTAGGCGATC TGGCTTCTCT ACAGGCATCT 660
CTGCACTACT TTTTCTAAGT ACGAGTTAAG CACTGTTAAA TGGACAGGGT TTAATTACTT 720
AAAAGGCAGG GCTCTTTTAC ATCTTGCAGA TTCCTGGGCT CTGCGCAAAC CTTCCCGTGC 780
TGCATCTCAG TAAGGCCCAG GAAACCGCGC TTCACAGGCA CAGACTGGTT TCTGACAAGA 840
GGCTGCGTCT GCACCGCGCA TGGGCCAAGA TGAGCCGCTC CACTTGCCGC AGCCGCAGCC 900
GCAGCCGCAG CCGAAGCCGA AGCCGAAGCC AAAGCCAAAG CCGAAACCGA AACCGAAGCC 960
AAAGCCGAAG GCGAAACCGA AGCCAAACGG AAGCCAAAGC CGAAACCGAA GCCGAAGCCG 1020
AAGCCGAAGC CGAAGCCTCA CCCTCACCCT CACCCTCACC CTCACAGGAG CAATGAGGCT 1080
AACAGCCTTC TCCACCTCAC AGCACCATCT TTAAAGGGAT TCAACGAATT CCCAGCAAGA 1140
GAAGAGCACG GTGAGGAGCA CAAGAGTTCT CATTCAATTA AAAAAATAAG AAACAATGAG 1200
GGCCGGGGCC ACTCTGATGG TGGCAGCAGT TACCCTTGGG GGAGGGCAGT GTCCCCAGAC 1260
GCCTGGCCCT GGGCTAAATG TGTTCCGTGG ATTACCACAT TTAATCCATG GCCAACACTA 1320
TCACTGTCCT CTCACTGAAG GACTCAGCTG AGGTCCCGAG GGGATGGGCT GGGGGGCGGT 1380
CCTCCACTCC AGATCCCCTA CGCCCCAGGC TCTACCTCTA CGCCTCCTGC CCCACCTGCA 1440
GCACCACTAC TCCAGGAAGC CCAGGTTTCC CCTCCACGGG AGATAAATGT TTCTAGAGCA 1500
AAATCTGGAA ATGCTTTTTT TTTTTTTTTT AAGATAAAAT TCCTGAGTTC ACACTGATAC 1560
TTCCCATAGA AATTCAGGAC TAAAGTTTTC ATTCATCCTT TTCTTTGTGA CATCTGCACC 1620
TCCCTTCAGC CCCACGGAGA ATCCTGGTTC TCAAGGACAT AGGGGATGAC AGAACTGGAA 1680
TATCCCACAG ACGCAGGGGA TGGCGGGAGT GGGATACCCC ACAGACACAG GGGATGACAG 1740
AGCTGGAATA TCCTACAGAC ACATGAGATG GCGGAACTGG GATACCCCAT AGACGCAGGG 1800
GGTGGCGGAA GTGGAATATC CATAGACACA AGGGGTGGCG GAAGTGGGAT 1850
|
