Tag | Content |
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EnhancerAtlas ID | HS083-01245 |
Organism | Homo sapiens |
Tissue/cell | HCC1954 |
Coordinate | chr19:33531290-33533720 |
SNPs | Number: 1 | ID | Chromosome | Position | Genome Version |
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TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
FOXP2 | MA0593.1 | chr19:33532688-33532699 | TTTGTTTACTT | - | 6.62 | Foxd3 | MA0041.1 | chr19:33531867-33531879 | AAACAAACAAAC | - | 6.32 | HES2 | MA0616.2 | chr19:33532960-33532970 | GGCACGTGCC | + | 6.02 | HES2 | MA0616.2 | chr19:33532960-33532970 | GGCACGTGCC | - | 6.02 | MEF2C | MA0497.1 | chr19:33531312-33531327 | TTTTATTTTTAGTTT | - | 6.1 | NKX2-3 | MA0672.1 | chr19:33533006-33533016 | ACCACTTGAA | + | 6.02 | RREB1 | MA0073.1 | chr19:33532089-33532109 | CCTCCAAACATCCCCCACCC | + | 6.14 | ZEB1 | MA0103.3 | chr19:33533183-33533194 | CCCACCTGCCC | + | 6.14 |
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| Number of super-enhancer constituents: 18 | ID | Coordinate | Tissue/cell |
SE_23354 | chr19:33531310-33533037 | Colon_Crypt_1 | SE_23354 | chr19:33533041-33533729 | Colon_Crypt_1 | SE_24632 | chr19:33531833-33532986 | Colon_Crypt_2 | SE_24632 | chr19:33533052-33533609 | Colon_Crypt_2 | SE_24867 | chr19:33531356-33533794 | Colon_Crypt_3 | SE_27867 | chr19:33529698-33533862 | Fetal_Intestine | SE_28788 | chr19:33529691-33534092 | Fetal_Intestine_Large | SE_32296 | chr19:33531754-33533737 | Gastric | SE_33901 | chr19:33530645-33533837 | HCC1954 | SE_35571 | chr19:33529621-33533888 | HepG2 | SE_42005 | chr19:33532234-33532844 | LNCaP | SE_42005 | chr19:33533043-33533521 | LNCaP | SE_47226 | chr19:33529418-33544806 | Panc1 | SE_50977 | chr19:33531317-33533825 | Sigmoid_Colon | SE_52660 | chr19:33530653-33533813 | Small_Intestine | SE_56754 | chr19:33531354-33532337 | VACO_400 | SE_56754 | chr19:33532345-33533023 | VACO_400 | SE_56754 | chr19:33533064-33533657 | VACO_400 |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 2 | Chromosome | Start | End |
chr19 | 33532238 | 33532582 | chr19 | 33531845 | 33532952 |
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| Number: 1 | ID | Chromosome | Start | End |
GH19I033039 | chr19 | 33529636 | 33535923 |
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Enhancer Sequence | TGCCACCACA CCCGGCTAAT TTTTTTATTT TTAGTTTTAG AGATGGGGTT TCACCATGTT 60 GGCCAGGATG GTCTCGATCT CTTGACCTTG TGATTCGCCC ACCTCGGCCT CCCAAAATGC 120 TGGAATTACA GAAGTGAGCC ACAGTGCTCA CCGGCCCTGC TTTAAATTTC ACAAGGACTG 180 CCTCAATTTC AGATAAACTT CATCATATTT CTACCCTAGC TTTTCTCAAG GGAGGGAAGC 240 TGGGAGAAGA CAGAATATTG TCTCTGGTTG GCCTAAATGA AAAAGTACGG TCAGGCATGG 300 TGGCTTACAC CTGTAATTCC AGCACTTTGG GAGGCTGAGG CAGGCAGATC ACCTGAGGTC 360 AGGAGTTCCA GACCAGCCTG GCCAACACCG TGAAACCCTG TCTTACTAAA AGTATAAAAT 420 TTAGCCAGGC ATGGTGGCAC ATGCCTATAA TCCCAGCTAC TCGGGAGGCT GAGGCACAAG 480 AATCACTTGA ATCCAGGAGG TGGAGGTTGC GCAGGTGAGC TGGTATCTCG ACACTGCACT 540 CCATCCTGGG AGACAGAATG AGACTCTGTC TCAAAAAAAA CAAACAAACC TGAAAAAAGT 600 GCATTTGAAA TATTTGATGG CTTCCTAAAA AAACTCCAGG AAGCTCATGG ACTCCCAGCT 660 GGAATGGATC AGAGAAGGGG AAGACTTTGA AGGATCATAA AATCTGGTTT TTCAAGTGCC 720 TGCCTAGCCA CGATACCCTC TGACAGTCCT CAGATAAGGG CTTAGCACCC CCATTTCCAT 780 TCCTGCATTT CTGGGGACAC CTCCAAACAT CCCCCACCCC TATTCCAACA GATCTACTTT 840 CCTTTGGGGG CTGCGGTAGG AAACCTGGGA ACCAGAAGAC AAACAGAAGG AAAGCAGGGC 900 CTAATTTACA ACTGAAACCA CCCATGGCCT GCAGAGACAG CCACGTAATG GGTCGCCCAG 960 GGACACTGAG GGGCCAGAGC GGAGCTTGGC AAAATGCCCT ATTTGTTTTC GGGAAACCGT 1020 TGGTGCTTGT TGAGTCAGAT TAATAAATAC CTTCAGGGTT TCCTCTGACA ACATTCTCCA 1080 GCAAGGGGTA CTTTGAACCT TTAGGCCACT GTGAGAATCA TTAACAACCC CCCACTCCTG 1140 CCCCTGCCAA CCCAACCACT GCCAGTTTAA CAATGAGCTT GAGTCAGGCT CGGGCCTCAG 1200 AAAGGGTGAC TGCTGTTGTC GTTAAGAGAA CAAGGCACAC AAAACTGCCC TAGTTCCTGC 1260 CTGAGAAAGT CCAAGTTCCC TGCTCACAGG GGCCTCTCTG ACCACCCTCT GTCTCTAAGG 1320 CTGGCCATCC TGGGCCAACC TCTATGATAT TCAGAGTTCA TTATTCCCTA GAAAACATCA 1380 CTTCCCTAGG TGATCTGATT TGTTTACTTG TCTATAAAAG TCTCCTCCCA TCCTCCAACA 1440 AGAGAAATCA CAAAAGCAGA GCCTCGCCTG ATCTTCAGGC ACCTCAACTG TGCCTGCCAC 1500 TTAACAGGTG CTCAATAGCC AGGCACAGGG GCTCACTCCT GAAATCCCAG CACTCTGGGA 1560 GGCTGAGGCA GGAGGATCAC TTGAGGCCAA GACTTTGAGA CAAGCCTGTG CAACACGGTG 1620 AAACCCTGTC TCTACTAAAA CTTTAAAAAA TTCAATTAGC CAGGTGTGCT GGCACGTGCC 1680 TGTAGTCCCA GCTATTTGGG AGGCTGAGGC AGGAGAACCA CTTGAACATG GGAGGCAGAG 1740 GTTGCAGTGA GCCAAGATTG AGCCATTGCA TTCCAGCCTG GGCAACAAGA GTGAAACTCC 1800 ATCTCAAAAA AAAAAAAAAG GTGCTCAATG AATCCATGAA TAGGTAAATC AATTGTTGTC 1860 CACTCCTAGG AAAGCCATAC ACCATCAAGG CTGCCCACCT GCCCCCTTGG CCACAGAGCA 1920 GGCCTGTCCA AGGGTCAACC AGAACCCTAG GCCACAAAAC ATACCACGGC CTTCCCAGCA 1980 CATGACAGGG AGTCCCAAAA TCGGGGGCCT CTCTCACGTC ACACAGATGA CATGAGTTGC 2040 TCTCTGCTAT GGGAGTGGAC AATTCCCATG TCCAAACTTG TCTTGGGATA GGGACACTGC 2100 TTGACTTTTT AAAAGCCAAA ACGCTACAGT ATTTTTCCCA GCCTCCTCCA GTAACAACCT 2160 GCTTTGCACC CAGTTGCAAA AGGAGCTGGA GAAGAGATTC CCAGACAAAC TTCCCACCCA 2220 GGACCTCAAG TCATCAGGTA TTCCGTGAGT AACAAAAGCA ACACAGGCCA GGCACAGTGG 2280 CTCATGTTTG TAATCCCAGC ACTCTGGGAG ACCAAGGCAG GAGGATCACT TGAGGACAAC 2340 AGTTCGAGAA CAACCTGGGC AACACAGCAA GACCCTGTCT CTACAAATAA TTTTTAAAAA 2400 ATCAGTCGGG CATTGGCCAG GCACAGTGGC 2430
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