EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS083-01016

Organism

Homo sapiens

Tissue/cell

HCC1954

Coordinate

chr17:37866140-37866330

Target genes

Number: 28
Name	Ensembl ID

MED1	ENSG00000125686
CDK12	ENSG00000167258
AC087491.2	ENSG00000214546
PPP1R1B	ENSG00000131771
STARD3	ENSG00000131748
TCAP	ENSG00000173991
PNMT	ENSG00000141744
PGAP3	ENSG00000161395
ERBB2	ENSG00000141736
MIEN1	ENSG00000141741
GRB7	ENSG00000141738
IKZF3	ENSG00000161405
GSDMB	ENSG00000073605
ORMDL3	ENSG00000172057
LRRC3C	ENSG00000204913
GSDMA	ENSG00000167914
PSMD3	ENSG00000108344
MED24	ENSG00000008838
THRA	ENSG00000126351
NR1D1	ENSG00000126368
MSL1	ENSG00000188895
CASC3	ENSG00000108349
RAPGEFL1	ENSG00000108352
WIPF2	ENSG00000171475
CDC6	ENSG00000094804
RARA	ENSG00000131759
IGFBP4	ENSG00000141753
TNS4	ENSG00000131746

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

SE_24979	chr17:37866101-37866722	Colon_Crypt_3
SE_33753	chr17:37854676-37869514	HCC1954

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH17I039709

chr17

37866102

37866722

Enhancer Sequence

CTCAGGGAGG CCTGGAGTCA GGGAAGGGGA GGGCTGGGGC CGGGTGGAAT GCAGGTGTCA 60
TACAGGTGAC ATGGGAGGGG TGGGATAACA GGCTTGGGAT GTCTCCCCTG GGCCAGGTAG 120
TCTCCCTAGA AGGTGATGCT GATGAGGGTC TGGTGCCCAG GGCGCCACTC AGCCCTCATC 180
CTGCCCTTTG 190