EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS083-01004

Organism

Homo sapiens

Tissue/cell

HCC1954

Coordinate

chr17:37649140-37650770

Target genes

Number: 23
Name	Ensembl ID

FBXL20	ENSG00000108306
MED1	ENSG00000125686
CDK12	ENSG00000167258
STARD3	ENSG00000131748
TCAP	ENSG00000173991
PNMT	ENSG00000141744
PGAP3	ENSG00000161395
ERBB2	ENSG00000141736
MIEN1	ENSG00000141741
IKZF3	ENSG00000161405
GSDMB	ENSG00000073605
ORMDL3	ENSG00000172057
LRRC3C	ENSG00000204913
GSDMA	ENSG00000167914
PSMD3	ENSG00000108344
MED24	ENSG00000008838
THRA	ENSG00000126351
NR1D1	ENSG00000126368
MSL1	ENSG00000188895
CASC3	ENSG00000108349
RAPGEFL1	ENSG00000108352
WIPF2	ENSG00000171475
RARA	ENSG00000131759

TF binding sites/motifs

Number: 8

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Foxd3	MA0041.1	chr17:37649241-37649253	GTTTGTTTGTTT	+	6.32
Foxd3	MA0041.1	chr17:37649245-37649257	GTTTGTTTGTTT	+	6.32
Foxd3	MA0041.1	chr17:37649249-37649261	GTTTGTTTGTTT	+	6.32
Foxd3	MA0041.1	chr17:37649253-37649265	GTTTGTTTGTTT	+	6.32
MEF2A	MA0052.3	chr17:37650082-37650094	ACTAAAAATAGA	+	6.27
MEF2B	MA0660.1	chr17:37650082-37650094	ACTAAAAATAGA	+	6.32
MEF2C	MA0497.1	chr17:37650080-37650095	CTACTAAAAATAGAA	+	6.57
Nr2f6(var.2)	MA0728.1	chr17:37649474-37649489	TGAACTCCTGACCTC	-	6.22

HEDD

Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder
Number of disease enhancers: 1
Chromosome	Start	End

chr17

37649670

37650044

Enhancer Sequence

CAGGTAAATA TTGCCACAAA ATTTTAGATG TCAGAATGTT AACAATTTAG CAATACTAAT 60
ATCTTAAGTG GATTTAGCAA AAGTAAATTC TGAGGTGTTT TGTTTGTTTG TTTGTTTGTT 120
TGTTTTTTGA GATGGAGTCT TGCTCCCCAG GCTGGAGTGC AGTGGTGCAG TCTCAACTCA 180
CTGCAAGCTC CGCCTCCTGG GTTCACACCA TTCTCCTGCC TCAGCCTCCC GAGTAACTGG 240
GATTACAGAC CGTGCGCAAC CACACTCGAC TAATTTTTGT TTTTTTTTTT TTTTTAGTAG 300
AAACAGGGTT CCACTATGTC GTCCAGGCTG GTCTTGAACT CCTGACCTCA AGCAATCTGC 360
CCACCTCGGC CTCCCAAAGT GCTGGGATTA TAGATGTGAG CCACGGCGCC AGGCCTTTTT 420
TTATTTTTAT TTTTTGAGAC GGGGTCTTGC GCTGTCATCC AGTCTGGAGT GCAGTGAGTG 480
GATCAATCTC TGCTCACTGC AGGCTCTGCC TCCTGGGTTC AAGCGATGCC TCTGCATCAG 540
CCTCCCGAGT AGCTGGGGTT ACAGGCATGC ACCACCACAC CCAGCTAATT TCTGTATTTT 600
TAGTAGAGAT GGGGTTTTAC CATGTTGGCC AGGCAGTCTT GAATTCCAGG CTGGTCTTGA 660
ACTCCTAACC TGAAATAGCC ACCCACCTCA GCCTCCCAAA GTGCTGGGAT TACAGGCATG 720
AGCCACCACG CCTGGCCAAA TTTTTAGTTC TAGTTTTGTC TCCAAAAGTT ATTGAGTAGA 780
TCAAAGGTTT CCAAAAGAAT ACTATAATTA TAACTTTTAA AACTCTCCAG CTGGGTGTGG 840
TGAGTCATGC CTGTAATTTC AGCACTTTGG GAGGCCAGGT GGGCAGATCA CGAGGTCAGG 900
AGATTGAGAC CATCCTGGCT AACATGGTGA AACCCCGTTT CTACTAAAAA TAGAAAAAAT 960
TAGCCAGGCG TGGTGCCACA CGCCTGTAGT CCCAGCTACT CAGGAGGCGG AGGCAGGAGA 1020
ATCACTTGAA CCTAGTAGGC GGAGGTTGCA ATGAGCGGAG ATCGCGCCAG TGCCCTGCAG 1080
CCTGGGTGAC AGAGCAAGAC TCCATCTCAA AAACAAAAAA TTCAAGTCTT AAGAAAAAAA 1140
TTAAAGCCAG GAAAGGGAAT ATAAAATTTC CTTTTTTGTT TTTTTATTGA GAAGGAGTCT 1200
CACTCTGTCA CCCAGGGTGG AGTGCAATGA TGCGATCTCA GCTCACTGCA ACCTCTGCTC 1260
ACCGCAACCT CTGCCTCCCG GGTTCAAGCA ATTCTCCTGT CTCAGCCTCC TGAGTAGCTG 1320
GGATTACAGG CATCCACCAC CACGCCCAGC TAATTTTTGT ATTTTAATAG AGACGGGGTT 1380
TCACCACGTT GGCTAGGCTG GTCTCGAATT CCTAACCTCA GGTGATCCGC AGGCCTTGGC 1440
CTCCCAAAGT GTTGGGATTA CAGGTGTGAG CCAGTGCGCC TGGCCTAGAG TTTACTTTTT 1500
AAAGGTGTAT AAGTATCTCG TGTAAGCATT AAAGTAAGCA CTAAGTTTGT CTTCCAGAGC 1560
AAGGGCATAT ATTGCTGGTT CACAATAGTG GCCAAAAATG CTCATTGATA ATAACAGTTT 1620
ACATTTGTTT 1630