EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

EnhancerAtlas 2.0 integrated enhancers from 12 high-throupghput technologies including P300, Histone, POLR2A, TF-binding, DHS, FAIRE, Mnase-seq, GRO-seq, STARR-seq, CAGE, CHIA-PET, and MPRA. Users could click any enhancer to view its detailed information.


Cortex | Mus musculus

Cell type: Thin layer cell of the brain | Tissue: Brain.

The tissue/cell type 'Cortex' in Mus musculus contains 6374 enhancers. Enhancers

Show: chr9>>chr1>>chr2>>chr3>>chr4>>chr5>>chr6>>chr7>>chr8>>chr9>>chr10>>chr11>>chr12>>chr13>>chr14>>chr15>>chr16>>chr17>>chr18>>chr19>>chrX>>chrY>>All


ID Coordinate SNPs TF binding sites Other Evidence
MM032-05857chr9:4309930-431050000--
MM032-05858chr9:4795360-479584000--
MM032-05859chr9:7836340-783669000dbSUPER
MM032-05860chr9:7836800-783698000dbSUPER
MM032-05861chr9:7950590-795133000dbSUPER
MM032-05862chr9:8902080-890229000--
MM032-05863chr9:10904320-1090448000--
MM032-05864chr9:13553840-1355401000--
MM032-05865chr9:13632500-1363281000--
MM032-05866chr9:14081070-1408153003--
MM032-05867chr9:14184680-1418511000dbSUPER
MM032-05868chr9:14589200-1458937000--
MM032-05869chr9:15110890-1511110002--
MM032-05870chr9:15514280-1551436000dbSUPER
MM032-05871chr9:15514440-1551482000dbSUPER
MM032-05872chr9:18096900-1809718000--
MM032-05873chr9:20412070-2041233000--
MM032-05874chr9:20449330-2044963000dbSUPER
MM032-05875chr9:20449700-2044980000dbSUPER
MM032-05876chr9:20530780-2053174007--
MM032-05877chr9:20673380-2067352005--
MM032-05878chr9:20807440-2080752004--
MM032-05879chr9:20836770-2083724001--
MM032-05880chr9:20841890-2084202001--
MM032-05881chr9:20842280-2084264002--
MM032-05882chr9:20877140-2087751000--
MM032-05883chr9:20877620-2087770000--
MM032-05884chr9:20877760-2087783000--
MM032-05885chr9:20877950-2087849007--
MM032-05886chr9:21092080-2109214000--
MM032-05887chr9:21092210-2109230001--
MM032-05888chr9:21095120-2109525000--
MM032-05889chr9:21172540-2117297003dbSUPER
MM032-05890chr9:21173040-2117326000dbSUPER
MM032-05891chr9:21396660-2139697001--
MM032-05892chr9:21397510-2139759000--
MM032-05893chr9:21420840-2142128000--
MM032-05894chr9:21602590-2160292000dbSUPER
MM032-05895chr9:21722010-2172246001--
MM032-05896chr9:21760450-2176071000--
MM032-05897chr9:21807530-2180784000--
MM032-05898chr9:21875820-21876260013--
MM032-05899chr9:21961350-2196184000dbSUPER
MM032-05900chr9:21969220-2196982003dbSUPER
MM032-05901chr9:22111720-2211199000dbSUPER
MM032-05902chr9:22272170-2227251001--
MM032-05903chr9:24306970-2430728000--
MM032-05904chr9:25060300-2506042000--
MM032-05905chr9:26838080-2683820002--
MM032-05906chr9:26962330-2696287000--
MM032-05907chr9:26999010-2700014000--
MM032-05908chr9:27107130-2710814000--
MM032-05909chr9:27599030-2759954000--
MM032-05910chr9:31018890-3101920000--
MM032-05911chr9:31087160-3108913006dbSUPER
MM032-05912chr9:34924490-3492495002dbSUPER
MM032-05913chr9:34983160-3498335000--
MM032-05914chr9:35018120-3501839000--
MM032-05915chr9:35018990-3501925000--
MM032-05916chr9:35075030-3507530000--
MM032-05917chr9:36629470-3662986000dbSUPER
MM032-05918chr9:36689030-3668965001--
MM032-05919chr9:37175340-3717582000--
MM032-05920chr9:37209730-3721001000--
MM032-05921chr9:37347270-3734745000--
MM032-05922chr9:37348080-3734891000dbSUPER
MM032-05923chr9:37349070-3734993001dbSUPER
MM032-05924chr9:37359200-3736012000dbSUPER
MM032-05925chr9:37420340-3742114001--
MM032-05926chr9:37432970-3743357000--
MM032-05927chr9:40049080-4004984006dbSUPER
MM032-05928chr9:40077180-4007755004--
MM032-05929chr9:40150080-4015034000dbSUPER
MM032-05930chr9:40152200-4015474005dbSUPER
MM032-05931chr9:40189030-4018962000dbSUPER
MM032-05932chr9:40494440-4049455000--
MM032-05933chr9:40609430-4060969001dbSUPER
MM032-05934chr9:41184750-4118733004dbSUPER
MM032-05935chr9:41254710-4125515002--
MM032-05936chr9:41255260-4125594000--
MM032-05937chr9:41389480-4138964000dbSUPER
MM032-05938chr9:41543130-4154474003dbSUPER
MM032-05939chr9:41699030-4169942000dbSUPER
MM032-05940chr9:41916530-4191698003--
MM032-05941chr9:42279940-4228014000--
MM032-05942chr9:42924190-4292455000--
MM032-05943chr9:43879700-4388087000dbSUPER
MM032-05944chr9:43891480-4389208001dbSUPER
MM032-05945chr9:43893410-4389466006dbSUPER
MM032-05946chr9:43895530-4389602000dbSUPER
MM032-05947chr9:44152030-4415209000dbSUPER
MM032-05948chr9:44169450-4416952000--
MM032-05949chr9:44205070-4420517000dbSUPER
MM032-05950chr9:44205520-4420564000dbSUPER
MM032-05951chr9:44413060-4441398006dbSUPER
MM032-05952chr9:44575480-4457575000--
MM032-05953chr9:44607050-4460726000--
MM032-05954chr9:44728320-4472869000--
MM032-05955chr9:44863400-4486349002--
MM032-05956chr9:45240410-4524122002--
MM032-05957chr9:45345920-4534641001dbSUPER
MM032-05958chr9:45762590-4576280000--
MM032-05959chr9:46197380-4619820004--
MM032-05960chr9:46596650-4659738000--
MM032-05961chr9:47338580-47338910010--
MM032-05962chr9:48302990-4830325000--
MM032-05963chr9:48531950-4853261000dbSUPER
MM032-05964chr9:48548450-4854889002dbSUPER
MM032-05965chr9:48643130-4864345000--
MM032-05966chr9:48643720-4864389000--
MM032-05967chr9:48863890-4886408000--
MM032-05968chr9:49605700-4960678005--
MM032-05969chr9:50362950-5036312000--
MM032-05970chr9:50411650-5041184000--
MM032-05971chr9:50412140-5041275002--
MM032-05972chr9:50467210-5046729000--
MM032-05973chr9:50506440-5050756003--
MM032-05974chr9:50561580-5056209000dbSUPER
MM032-05975chr9:50575820-5057596000--
MM032-05976chr9:50693570-5069415000dbSUPER
MM032-05977chr9:50816710-5081684000--
MM032-05978chr9:51086380-5108644000--
MM032-05979chr9:51573710-5157517004--
MM032-05980chr9:51770900-5177137000--
MM032-05981chr9:51856530-5185672000--
MM032-05982chr9:51856810-5185716000--
MM032-05983chr9:52486620-5248739004--
MM032-05984chr9:52487540-5248768000--
MM032-05985chr9:53474810-5347514000--
MM032-05986chr9:53822340-5382283000--
MM032-05987chr9:54349030-5434915001--
MM032-05988chr9:54434350-5443468000--
MM032-05989chr9:54547660-5454787000--
MM032-05990chr9:54798760-5479913000--
MM032-05991chr9:54997630-5499774000--
MM032-05992chr9:55056990-5505715000--
MM032-05993chr9:55890010-5589038000--
MM032-05994chr9:56008180-5600860000--
MM032-05995chr9:56266730-5626706008--
MM032-05996chr9:56481510-5648288001dbSUPER
MM032-05997chr9:56503410-56505900023dbSUPER
MM032-05998chr9:56643260-5664531000--
MM032-05999chr9:56748820-5674984003--
MM032-06000chr9:56843460-5684369001--
MM032-06001chr9:56920550-5692178000dbSUPER
MM032-06002chr9:56923170-5692388005--
MM032-06003chr9:57287640-5728787001--
MM032-06004chr9:57315100-5731562000--
MM032-06005chr9:57369220-5736986001--
MM032-06006chr9:57385640-5738583000--
MM032-06007chr9:57400220-5740051000dbSUPER
MM032-06008chr9:57556500-5755661000--
MM032-06009chr9:57611620-5761288001dbSUPER
MM032-06010chr9:57758860-5775905000--
MM032-06011chr9:57788130-5778862000dbSUPER
MM032-06012chr9:57788680-5778913001dbSUPER
MM032-06013chr9:57798010-5780011000dbSUPER
MM032-06014chr9:58337350-5833747000--
MM032-06015chr9:58402350-5840414005dbSUPER
MM032-06016chr9:59333560-5933378000--
MM032-06017chr9:59387780-5938796000dbSUPER
MM032-06018chr9:59437320-5943780003--
MM032-06019chr9:59504450-5950486001dbSUPER
MM032-06020chr9:59505060-5950554000dbSUPER
MM032-06021chr9:59535250-5953577005dbSUPER
MM032-06022chr9:59539380-5954030003dbSUPER
MM032-06023chr9:59599150-5959947002--
MM032-06024chr9:60496500-6049728000--
MM032-06025chr9:60497340-6049780000--
MM032-06026chr9:60561210-6056198000--
MM032-06027chr9:60713890-6071417000--
MM032-06028chr9:60714200-6071434000--
MM032-06029chr9:62189360-6218948001dbSUPER
MM032-06030chr9:62189890-6219146002dbSUPER
MM032-06031chr9:62299930-6230094001dbSUPER
MM032-06032chr9:62382810-6238445000dbSUPER
MM032-06033chr9:62828380-6282865000--
MM032-06034chr9:62906530-6290762000--
MM032-06035chr9:62939720-6294085003--
MM032-06036chr9:62956600-6295716000--
MM032-06037chr9:62979970-6298088000--
MM032-06038chr9:63246440-6324668000--
MM032-06039chr9:63450000-6345017000--
MM032-06040chr9:64021240-6402144000--
MM032-06041chr9:64043280-6404356000dbSUPER
MM032-06042chr9:64100930-6410101000dbSUPER
MM032-06043chr9:64188260-6418835000--
MM032-06044chr9:64188580-6418879001--
MM032-06045chr9:64584980-6458539001--
MM032-06046chr9:64658820-6465898000dbSUPER
MM032-06047chr9:64868760-6486926000--
MM032-06048chr9:65142370-6514247000--
MM032-06049chr9:65308960-6530918000--
MM032-06050chr9:65592140-6559279003--
MM032-06051chr9:65908200-6590826000--
MM032-06052chr9:66123180-6612371000--
MM032-06053chr9:66198420-6619894000dbSUPER
MM032-06054chr9:66642880-6664305000--
MM032-06055chr9:66822760-6682284000--
MM032-06056chr9:66891100-6689138000dbSUPER
MM032-06057chr9:69245860-6924630000--
MM032-06058chr9:69837490-6983795000--
MM032-06059chr9:69988520-6998911000--
MM032-06060chr9:70390880-7039130000--
MM032-06061chr9:70527060-7052756000dbSUPER
MM032-06062chr9:71333120-7133349001--
MM032-06063chr9:71958750-7195882000--
MM032-06064chr9:71959000-7195938000--
MM032-06065chr9:71980410-7198147006--
MM032-06066chr9:72123030-7212355001--
MM032-06067chr9:72487430-7248811002dbSUPER
MM032-06068chr9:72510420-7251077000dbSUPER
MM032-06069chr9:72833480-7283381000--
MM032-06070chr9:72887070-7288726000--
MM032-06071chr9:72887670-7288781000--
MM032-06072chr9:74801080-7480125000dbSUPER
MM032-06073chr9:74823330-7482391000--
MM032-06074chr9:74824080-7482429000--
MM032-06075chr9:74919460-7492034000--
MM032-06076chr9:75082850-7508408000dbSUPER
MM032-06077chr9:75090670-7509220004dbSUPER
MM032-06078chr9:75102420-75102840011dbSUPER
MM032-06079chr9:75162190-7516272000dbSUPER
MM032-06080chr9:75256720-7525700000dbSUPER
MM032-06081chr9:75257160-7525766000dbSUPER
MM032-06082chr9:75407110-7540730002--
MM032-06083chr9:75458320-7545883000--
MM032-06084chr9:75862980-7586329000dbSUPER
MM032-06085chr9:77765330-7776567000--
MM032-06086chr9:77956460-7795680000dbSUPER
MM032-06087chr9:78296310-7829668000--
MM032-06088chr9:78328570-7832944001dbSUPER
MM032-06089chr9:79607260-7960744000--
MM032-06090chr9:79915370-7991580001--
MM032-06091chr9:80013030-8001318000--
MM032-06092chr9:82723940-8272413000--
MM032-06093chr9:82868750-8286885000--
MM032-06094chr9:83442110-8344220000--
MM032-06095chr9:86774410-8677509001--
MM032-06096chr9:88333390-8833350000--
MM032-06097chr9:88376570-8837689001--
MM032-06098chr9:88443340-8844352000--
MM032-06099chr9:88614200-8861449001--
MM032-06100chr9:89106140-8910647001--
MM032-06101chr9:89805110-8980523001--
MM032-06102chr9:94437400-9443763001--
MM032-06103chr9:95411900-9541223001--
MM032-06104chr9:95649950-9565008000--
MM032-06105chr9:95855360-9585556000--
MM032-06106chr9:96264400-9626446000--
MM032-06107chr9:96619630-9662088001dbSUPER
MM032-06108chr9:96629700-9663018001dbSUPER
MM032-06109chr9:96632300-9663266000dbSUPER
MM032-06110chr9:96632730-9663302000dbSUPER
MM032-06111chr9:96633230-9663383000dbSUPER
MM032-06112chr9:96761440-9676197000--
MM032-06113chr9:97010990-9701132000dbSUPER
MM032-06114chr9:99040340-9904040000dbSUPER
MM032-06115chr9:99143900-9914412000--
MM032-06116chr9:99335020-9933664000dbSUPER
MM032-06117chr9:99468890-9946902000--
MM032-06118chr9:99530380-9953086000--
MM032-06119chr9:100544610-10054543000--
MM032-06120chr9:100934680-10093508000--
MM032-06121chr9:101153310-10115386000dbSUPER
MM032-06122chr9:101153900-10115399000dbSUPER
MM032-06123chr9:102528040-10252823000--
MM032-06124chr9:102528670-10252931000--
MM032-06125chr9:102620230-10262134003dbSUPER
MM032-06126chr9:103014550-10301536001--
MM032-06127chr9:103015680-10301626004--
MM032-06128chr9:103966230-10396638000--
MM032-06129chr9:105033540-10503362000--
MM032-06130chr9:105033890-10503397000--
MM032-06131chr9:105396920-10539722001--
MM032-06132chr9:106073710-10607425001--
MM032-06133chr9:106105610-10610604003--
MM032-06134chr9:106192360-10619356000dbSUPER
MM032-06135chr9:106201860-10620302002dbSUPER
MM032-06136chr9:106220350-10622096002dbSUPER
MM032-06137chr9:106229460-10623064000dbSUPER
MM032-06138chr9:106239580-10624019000dbSUPER
MM032-06139chr9:106273550-10627540003dbSUPER
MM032-06140chr9:106331970-10633230000--
MM032-06141chr9:106332340-10633246000--
MM032-06142chr9:106349680-10634986000--
MM032-06143chr9:106357440-10635781000--
MM032-06144chr9:106566910-106567700010dbSUPER
MM032-06145chr9:106691190-10669131000--
MM032-06146chr9:106793980-10679414000--
MM032-06147chr9:107240280-10724061000dbSUPER
MM032-06148chr9:107457250-10745761000dbSUPER
MM032-06149chr9:107483260-10748337000dbSUPER
MM032-06150chr9:107535260-10753662002dbSUPER
MM032-06151chr9:107537080-10753743001dbSUPER
MM032-06152chr9:107672680-10767321001--
MM032-06153chr9:107774500-10777497003--
MM032-06154chr9:107838380-10783872000--
MM032-06155chr9:107838980-10783955000--
MM032-06156chr9:107905150-10790575000--
MM032-06157chr9:108089560-10809115005dbSUPER
MM032-06158chr9:108091730-10809234003dbSUPER
MM032-06159chr9:108165680-10816581001--
MM032-06160chr9:108207870-10820805000--
MM032-06161chr9:108208880-10820906000--
MM032-06162chr9:108241880-10824201000dbSUPER
MM032-06163chr9:108250340-10825049000dbSUPER
MM032-06164chr9:108392530-10839261000--
MM032-06165chr9:108393220-10839363001--
MM032-06166chr9:108419570-10841966000--
MM032-06167chr9:108419970-10842054000--
MM032-06168chr9:108462960-10846310000--
MM032-06169chr9:108480630-10848082000--
MM032-06170chr9:108481630-10848176000--
MM032-06171chr9:108489660-10849107002dbSUPER
MM032-06172chr9:108499320-10849953000--
MM032-06173chr9:108551020-10855155001--
MM032-06174chr9:108686070-10868707006--
MM032-06175chr9:108698720-10869883000--
MM032-06176chr9:108839160-10883923000--
MM032-06177chr9:108894150-10889436000dbSUPER
MM032-06178chr9:108961440-10896170000dbSUPER
MM032-06179chr9:108998150-10899840000dbSUPER
MM032-06180chr9:108999810-10900034000dbSUPER
MM032-06181chr9:109834440-10983491002--
MM032-06182chr9:109954350-10995452001--
MM032-06183chr9:109956020-10995680004--
MM032-06184chr9:110019670-11001986000--
MM032-06185chr9:110152040-11015346006--
MM032-06186chr9:110153650-11015387000--
MM032-06187chr9:110207850-11020836000--
MM032-06188chr9:110378820-11037896000--
MM032-06189chr9:110559160-11055979001dbSUPER
MM032-06190chr9:111020890-11102136001--
MM032-06191chr9:111341850-11134223000--
MM032-06192chr9:112087220-11208761000--
MM032-06193chr9:112089830-11208997000--
MM032-06194chr9:112090010-11209009000--
MM032-06195chr9:112090430-11209059000--
MM032-06196chr9:112130170-11213051000dbSUPER
MM032-06197chr9:112134650-11213483000dbSUPER
MM032-06198chr9:112135000-11213520000dbSUPER
MM032-06199chr9:112135410-11213619000dbSUPER
MM032-06200chr9:112136390-11213678003dbSUPER
MM032-06201chr9:112137340-11213760004dbSUPER
MM032-06202chr9:113701720-11370244000--
MM032-06203chr9:113702580-11370271000--
MM032-06204chr9:113935320-11393581002--
MM032-06205chr9:114582080-11458266000--
MM032-06206chr9:114598140-11459832000--
MM032-06207chr9:114598400-11459856000--
MM032-06208chr9:117950070-11795024000--
MM032-06209chr9:118836050-11883663000dbSUPER
MM032-06210chr9:118912930-11891530007dbSUPER
MM032-06211chr9:119001790-11900247001--
MM032-06212chr9:119250800-11925094000dbSUPER
MM032-06213chr9:119311710-11931194000--
MM032-06214chr9:119846350-11984657000--
MM032-06215chr9:120213310-12021420000--
MM032-06216chr9:120401950-12040228000--
MM032-06217chr9:120480650-12048086000--
MM032-06218chr9:120842750-12084284000--
MM032-06219chr9:121291680-12129321000dbSUPER
MM032-06220chr9:121404510-12140471000--
MM032-06221chr9:121548990-12154977001--
MM032-06222chr9:121552040-12155222000dbSUPER
MM032-06223chr9:121619580-12161975000--
MM032-06224chr9:121619830-12161999000--
MM032-06225chr9:122026520-12202694000dbSUPER
MM032-06226chr9:122260950-12226146000dbSUPER
MM032-06227chr9:122714800-12271524000--
MM032-06228chr9:122859770-12285992003--
MM032-06229chr9:123022440-12302271002--
MM032-06230chr9:123439030-12343938000--
MM032-06231chr9:123760780-12376090000--
MM032-06232chr9:123837260-12383736000dbSUPER
MM032-06233chr9:123839880-12384043000dbSUPER