EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

EnhancerAtlas 2.0 integrated enhancers from 12 high-throupghput technologies including P300, Histone, POLR2A, TF-binding, DHS, FAIRE, Mnase-seq, GRO-seq, STARR-seq, CAGE, CHIA-PET, and MPRA. Users could click any enhancer to view its detailed information.


Cortex | Mus musculus

Cell type: Thin layer cell of the brain | Tissue: Brain.

The tissue/cell type 'Cortex' in Mus musculus contains 6374 enhancers. Enhancers

Show: chr3>>chr1>>chr2>>chr3>>chr4>>chr5>>chr6>>chr7>>chr8>>chr9>>chr10>>chr11>>chr12>>chr13>>chr14>>chr15>>chr16>>chr17>>chr18>>chr19>>chrX>>chrY>>All


ID Coordinate SNPs TF binding sites Other Evidence
MM032-03684chr3:5575700-557603000--
MM032-03685chr3:7366750-736695000--
MM032-03686chr3:7503520-750390000--
MM032-03687chr3:8510830-851166000--
MM032-03688chr3:8666080-866627000--
MM032-03689chr3:8666350-866650007--
MM032-03690chr3:8666570-866678000--
MM032-03691chr3:8766630-8767780010--
MM032-03692chr3:8923050-892358000--
MM032-03693chr3:9832890-983321000--
MM032-03694chr3:10012710-1001378001--
MM032-03695chr3:10331020-1033132000--
MM032-03696chr3:10351020-1035124000--
MM032-03697chr3:14534020-1453442001--
MM032-03698chr3:14579020-1457919000--
MM032-03699chr3:14886780-1488740000dbSUPER
MM032-03700chr3:16083520-1608387000--
MM032-03701chr3:17690180-1769126000dbSUPER
MM032-03702chr3:17693200-1769459008dbSUPER
MM032-03703chr3:17695010-1769566000dbSUPER
MM032-03704chr3:17696790-1769727000dbSUPER
MM032-03705chr3:19527990-1952885002--
MM032-03706chr3:21834320-2183547000dbSUPER
MM032-03707chr3:21975870-2197614000--
MM032-03708chr3:25042310-2504363001--
MM032-03709chr3:25802180-2580264000--
MM032-03710chr3:27837670-2783822000--
MM032-03711chr3:28074890-2807583006--
MM032-03712chr3:28162620-2816351000--
MM032-03713chr3:28457100-2845771001dbSUPER
MM032-03714chr3:28704460-2870474000--
MM032-03715chr3:30501610-3050186001--
MM032-03716chr3:30692300-3069309005--
MM032-03717chr3:30867740-3086828000--
MM032-03718chr3:30895000-3089511000--
MM032-03719chr3:30994070-3099415000--
MM032-03720chr3:31208660-3120909000--
MM032-03721chr3:32263730-3226441001--
MM032-03722chr3:32295320-3229610008--
MM032-03723chr3:32428610-3242869001--
MM032-03724chr3:32636120-3263655000--
MM032-03725chr3:32716790-3271714002--
MM032-03726chr3:33979920-3398010000--
MM032-03727chr3:34562200-3456336004dbSUPER
MM032-03728chr3:35653330-3565364000--
MM032-03729chr3:35831250-3583156000--
MM032-03730chr3:36050110-3605038000--
MM032-03731chr3:36374120-3637435002dbSUPER
MM032-03732chr3:36511950-3651217000--
MM032-03733chr3:37210950-3721127000dbSUPER
MM032-03734chr3:37317950-3731826000--
MM032-03735chr3:38383180-3838359000--
MM032-03736chr3:40549700-4054994000--
MM032-03737chr3:41368090-4136869003dbSUPER
MM032-03738chr3:41368980-4136955001dbSUPER
MM032-03739chr3:51029200-5102948000dbSUPER
MM032-03740chr3:51288500-5128877000--
MM032-03741chr3:51363910-5136443000dbSUPER
MM032-03742chr3:51592470-5159304001dbSUPER
MM032-03743chr3:51719690-5172017000--
MM032-03744chr3:51811210-5181213004--
MM032-03745chr3:51850700-5185141002dbSUPER
MM032-03746chr3:51905430-5190594000dbSUPER
MM032-03747chr3:51906260-5190739004dbSUPER
MM032-03748chr3:53266920-5326698000--
MM032-03749chr3:55046670-5504742000--
MM032-03750chr3:55155190-55157010013dbSUPER
MM032-03751chr3:55266000-5526651007--
MM032-03752chr3:55267030-5526821001--
MM032-03753chr3:55268280-5526854000--
MM032-03754chr3:57455420-5745550000--
MM032-03755chr3:57540120-5754052002--
MM032-03756chr3:57650640-5765127002--
MM032-03757chr3:58380790-5838130000--
MM032-03758chr3:60304800-6030510001dbSUPER
MM032-03759chr3:60305340-6030595001dbSUPER
MM032-03760chr3:63780230-6378065000--
MM032-03761chr3:65761630-6576172000--
MM032-03762chr3:65778050-6577913007--
MM032-03763chr3:67859120-6785918000--
MM032-03764chr3:68297270-6829800000dbSUPER
MM032-03765chr3:68298290-6829849000dbSUPER
MM032-03766chr3:68299170-6829936000dbSUPER
MM032-03767chr3:68375900-6837628000dbSUPER
MM032-03768chr3:68376580-6837684000dbSUPER
MM032-03769chr3:68379420-6838008000dbSUPER
MM032-03770chr3:68410260-6841062000--
MM032-03771chr3:69526040-6952633000--
MM032-03772chr3:72860390-7286046000--
MM032-03773chr3:78770830-7877120000--
MM032-03774chr3:78948590-7894877007--
MM032-03775chr3:78948800-7894969001--
MM032-03776chr3:78965420-7896626003dbSUPER
MM032-03777chr3:79089950-7909213001dbSUPER
MM032-03778chr3:80604240-8060556006--
MM032-03779chr3:80605700-8060610001--
MM032-03780chr3:81877490-8187791000--
MM032-03781chr3:81877990-8187849002--
MM032-03782chr3:81948830-8194959003--
MM032-03783chr3:82054090-8205497001--
MM032-03784chr3:84755690-8475613000--
MM032-03785chr3:84756560-8475700000--
MM032-03786chr3:84783430-8478506002--
MM032-03787chr3:84992030-8499245003--
MM032-03788chr3:86028670-8602878000--
MM032-03789chr3:87710630-8771109004dbSUPER
MM032-03790chr3:87803310-8780402000--
MM032-03791chr3:87946590-8794767000dbSUPER
MM032-03792chr3:87947910-8794936003dbSUPER
MM032-03793chr3:88004100-8800526001dbSUPER
MM032-03794chr3:88019600-8802070002dbSUPER
MM032-03795chr3:88024530-88026240014dbSUPER
MM032-03796chr3:88028730-8803046002dbSUPER
MM032-03797chr3:88033980-8803515000dbSUPER
MM032-03798chr3:88100530-8810068000--
MM032-03799chr3:88101180-8810158000--
MM032-03800chr3:88213720-8821407000dbSUPER
MM032-03801chr3:88262610-8826273000dbSUPER
MM032-03802chr3:88262800-8826290000dbSUPER
MM032-03803chr3:88306550-8830666000dbSUPER
MM032-03804chr3:88424660-8842502000dbSUPER
MM032-03805chr3:88425240-8842531000dbSUPER
MM032-03806chr3:88425520-8842567001dbSUPER
MM032-03807chr3:88425720-8842675001dbSUPER
MM032-03808chr3:88426910-8842933003dbSUPER
MM032-03809chr3:88429640-8843135001dbSUPER
MM032-03810chr3:88432490-8843370003dbSUPER
MM032-03811chr3:88433850-8843446003dbSUPER
MM032-03812chr3:88489800-8849026000--
MM032-03813chr3:88575070-8857621002--
MM032-03814chr3:88635030-8863618003--
MM032-03815chr3:88753660-8875378000--
MM032-03816chr3:88896830-8889718000--
MM032-03817chr3:88981570-8898182000dbSUPER
MM032-03818chr3:88987870-8898799000dbSUPER
MM032-03819chr3:89017400-8901773001dbSUPER
MM032-03820chr3:89049310-8904963000dbSUPER
MM032-03821chr3:89070520-8907065000--
MM032-03822chr3:89073630-8907374002dbSUPER
MM032-03823chr3:89073870-8907398000dbSUPER
MM032-03824chr3:89074060-8907430000dbSUPER
MM032-03825chr3:89083150-8908337000dbSUPER
MM032-03826chr3:89083560-8908400001dbSUPER
MM032-03827chr3:89153520-89153730011--
MM032-03828chr3:89197700-8919821000dbSUPER
MM032-03829chr3:89198310-8919844000dbSUPER
MM032-03830chr3:89519070-8951975000--
MM032-03831chr3:89764190-8976480004--
MM032-03832chr3:89766190-8976707000--
MM032-03833chr3:89856080-8985631000--
MM032-03834chr3:89883780-8988467002dbSUPER
MM032-03835chr3:90313000-9031311000--
MM032-03836chr3:90318940-9031931000--
MM032-03837chr3:90345230-9034591002--
MM032-03838chr3:90346090-9034622000--
MM032-03839chr3:93359130-9335936000dbSUPER
MM032-03840chr3:94269800-9427009000dbSUPER
MM032-03841chr3:94641980-9464294003--
MM032-03842chr3:94737080-9473753001--
MM032-03843chr3:94779000-9477916002--
MM032-03844chr3:94915130-9491526001--
MM032-03845chr3:95031860-9503200000dbSUPER
MM032-03846chr3:95033310-9503383000dbSUPER
MM032-03847chr3:95033920-9503517002dbSUPER
MM032-03848chr3:95084960-9508550000dbSUPER
MM032-03849chr3:95087540-9508765000dbSUPER
MM032-03850chr3:95119260-9511990000dbSUPER
MM032-03851chr3:95429090-9542919002dbSUPER
MM032-03852chr3:95463410-9546368001dbSUPER
MM032-03853chr3:95685510-9568607000--
MM032-03854chr3:95754660-9575564006dbSUPER
MM032-03855chr3:95789510-9578992006dbSUPER
MM032-03856chr3:95790000-9579029000dbSUPER
MM032-03857chr3:95797220-9579944001dbSUPER
MM032-03858chr3:95908740-9590902001--
MM032-03859chr3:95985220-9598538000--
MM032-03860chr3:95985640-9598662000--
MM032-03861chr3:96001200-9600147003--
MM032-03862chr3:96290010-9629118006--
MM032-03863chr3:96292040-9629330006--
MM032-03864chr3:96397690-9639800000--
MM032-03865chr3:96400730-9640128001--
MM032-03866chr3:96405390-9640557000--
MM032-03867chr3:96433950-9643411000--
MM032-03868chr3:96500450-9650090000--
MM032-03869chr3:96531120-9653127000--
MM032-03870chr3:96531830-9653229000--
MM032-03871chr3:96708900-9670910000--
MM032-03872chr3:97101510-9710238009dbSUPER
MM032-03873chr3:97571930-9757264004--
MM032-03874chr3:97691710-9769241002--
MM032-03875chr3:98186500-9818674000--
MM032-03876chr3:98945110-9894542000--
MM032-03877chr3:102824590-10282493000--
MM032-03878chr3:103719070-10371923000--
MM032-03879chr3:103772710-10377297001--
MM032-03880chr3:104315170-10431537000--
MM032-03881chr3:104796780-10479777003dbSUPER
MM032-03882chr3:104855140-10485581002dbSUPER
MM032-03883chr3:105507740-10550824009dbSUPER
MM032-03884chr3:105508300-10550837000dbSUPER
MM032-03885chr3:105508450-10550977009dbSUPER
MM032-03886chr3:105761550-10576177000--
MM032-03887chr3:105761810-10576206000--
MM032-03888chr3:106350140-10635059002--
MM032-03889chr3:106350830-10635126000--
MM032-03890chr3:106525020-10652541001--
MM032-03891chr3:106904670-10690581000dbSUPER
MM032-03892chr3:107319830-10732052000--
MM032-03893chr3:107331670-10733237002--
MM032-03894chr3:107339380-107340520026--
MM032-03895chr3:107434290-10743441000--
MM032-03896chr3:107498850-10749907000--
MM032-03897chr3:107562620-10756294000dbSUPER
MM032-03898chr3:107596070-10759695002dbSUPER
MM032-03899chr3:107734380-10773453000--
MM032-03900chr3:107887860-10788816000dbSUPER
MM032-03901chr3:107888340-10788875001dbSUPER
MM032-03902chr3:107948580-10794880000--
MM032-03903chr3:107957250-10795773003--
MM032-03904chr3:108090400-10809150001dbSUPER
MM032-03905chr3:108247610-10824791000--
MM032-03906chr3:108374660-10837490000--
MM032-03907chr3:108394510-10839500002--
MM032-03908chr3:115417420-11541762001dbSUPER
MM032-03909chr3:115710800-11571121000--
MM032-03910chr3:116364620-11636531000--
MM032-03911chr3:116510730-11651094000--
MM032-03912chr3:116671120-11667118000dbSUPER
MM032-03913chr3:117062510-11706294002--
MM032-03914chr3:117278850-11727904000--
MM032-03915chr3:119485970-11948611001--
MM032-03916chr3:120994900-12099517001--
MM032-03917chr3:121517500-12151792000--
MM032-03918chr3:121949020-12194922000--
MM032-03919chr3:121995470-12199650000--
MM032-03920chr3:122209510-12221055001dbSUPER
MM032-03921chr3:122321580-12232244000--
MM032-03922chr3:122627570-12262767000--
MM032-03923chr3:122686690-12268719000--
MM032-03924chr3:126300420-12630062000--
MM032-03925chr3:126864330-12686470001--
MM032-03926chr3:126864770-12686576000--
MM032-03927chr3:127111580-12711210000--
MM032-03928chr3:127255910-12725610000--
MM032-03929chr3:129238900-129239520014dbSUPER
MM032-03930chr3:129428150-12942829000--
MM032-03931chr3:130432970-13043303000--
MM032-03932chr3:130974710-13097479000--
MM032-03933chr3:131227940-13122830000--
MM032-03934chr3:132754430-13275454000--
MM032-03935chr3:132754940-13275542000--
MM032-03936chr3:133206590-13320716000--
MM032-03937chr3:135085680-13508622003--
MM032-03938chr3:135100600-13510108000dbSUPER
MM032-03939chr3:135101820-13510257003dbSUPER
MM032-03940chr3:136333860-13633403000--
MM032-03941chr3:136334220-13633443000--
MM032-03942chr3:136334540-13633537000--
MM032-03943chr3:137286840-13728709000--
MM032-03944chr3:137527660-13752778000--
MM032-03945chr3:137528030-13752809000--
MM032-03946chr3:137806560-13780717008--
MM032-03947chr3:138189510-13819003000--
MM032-03948chr3:138405620-13840585000--
MM032-03949chr3:138405930-13840694007--
MM032-03950chr3:138737480-13873799000--
MM032-03951chr3:138868970-13886913000--
MM032-03952chr3:142057920-14205854000--
MM032-03953chr3:142428250-14242847000--
MM032-03954chr3:143864620-14386477000--
MM032-03955chr3:143866300-14386671000--
MM032-03956chr3:144101300-14410233002--
MM032-03957chr3:144233760-14423404000--
MM032-03958chr3:144382160-14438286001dbSUPER
MM032-03959chr3:146067890-14606813000dbSUPER
MM032-03960chr3:146429360-14643034000--
MM032-03961chr3:146431360-14643173000--
MM032-03962chr3:146431840-14643222004--
MM032-03963chr3:146433340-14643347000--
MM032-03964chr3:146433650-14643373000--
MM032-03965chr3:146515550-14651590000--
MM032-03966chr3:148651370-14865255000dbSUPER
MM032-03967chr3:148652630-14865291005dbSUPER
MM032-03968chr3:151872700-15187279000--
MM032-03969chr3:151873660-15187411000--
MM032-03970chr3:152059720-15205981000dbSUPER
MM032-03971chr3:152643720-15264402000--
MM032-03972chr3:153187840-153188250047--
MM032-03973chr3:153575550-15357589000--
MM032-03974chr3:154479770-15448022001--
MM032-03975chr3:154755900-15475626001--
MM032-03976chr3:154756630-15475676000--
MM032-03977chr3:156223540-156224290012--
MM032-03978chr3:156224340-15622443000--
MM032-03979chr3:156225310-15622548000--
MM032-03980chr3:157197430-15719790002--
MM032-03981chr3:157694710-15769494003--
MM032-03982chr3:157699320-15769947000--
MM032-03983chr3:158223240-15822406000--