EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

EnhancerAtlas 2.0 integrated enhancers from 12 high-throupghput technologies including P300, Histone, POLR2A, TF-binding, DHS, FAIRE, Mnase-seq, GRO-seq, STARR-seq, CAGE, CHIA-PET, and MPRA. Users could click any enhancer to view its detailed information.


LNCaP-1F5 | Homo sapiens

Cell type: Epithelial cell | Tissue: Prostate | Disease: Prostate carcinoma.

The tissue/cell type 'LNCaP-1F5' in Homo sapiens contains 740 enhancers. Of these enhancers, 33 are associated with 36 SNPs. SNPs Enhancers

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ID Coordinate SNPs TF binding sites Other Evidence
HS119-00558chr6:24960980-2496194000GeneHancer;dbSUPER
HS119-00559chr6:25006470-2500737001GeneHancer;dbSUPER;HEDD
HS119-00560chr6:35689960-3569085002GeneHancer;dbSUPER
HS119-00561chr6:35693000-3569453006dbSUPER;HEDD
HS119-00562chr6:35694910-3569598018dbSUPER
HS119-00563chr6:53569250-5357006000--
HS119-00564chr6:58773450-58780320013GeneHancer;dbSUPER
HS119-00565chr6:61901450-6190246000--
HS119-00566chr6:61910520-6191211001--
HS119-00567chr6:61912150-6191471002--
HS119-00568chr6:108910260-10891112001GeneHancer;dbSUPER
HS119-00569chr6:134487640-13448852001GeneHancer;dbSUPER
HS119-00570chr6:134942050-13494356000GeneHancer
HS119-00571chr6:134951080-13495247002GeneHancer
HS119-00572chr6:138552310-13855330000GeneHancer;dbSUPER
HS119-00573chr6:138579820-13858085001GeneHancer;dbSUPER
HS119-00574chr6:142696060-14269787003GeneHancer;dbSUPER
HS119-00575chr6:168151470-16815218000GeneHancer;HEDD