EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

EnhancerAtlas 2.0 integrated enhancers from 12 high-throupghput technologies including P300, Histone, POLR2A, TF-binding, DHS, FAIRE, Mnase-seq, GRO-seq, STARR-seq, CAGE, CHIA-PET, and MPRA. Users could click any enhancer to view its detailed information.


LNCaP-1F5 | Homo sapiens

Cell type: Epithelial cell | Tissue: Prostate | Disease: Prostate carcinoma.

The tissue/cell type 'LNCaP-1F5' in Homo sapiens contains 740 enhancers. Of these enhancers, 33 are associated with 36 SNPs. SNPs Enhancers

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ID Coordinate SNPs TF binding sites Other Evidence
HS119-00363chr2:3473600-347455017GeneHancer;dbSUPER;HEDD
HS119-00364chr2:9140530-914191000GeneHancer;HEDD
HS119-00365chr2:10598680-1059897000GeneHancer
HS119-00366chr2:11710970-1171186000GeneHancer;dbSUPER
HS119-00367chr2:16829620-1683146001GeneHancer;dbSUPER
HS119-00368chr2:17124380-1712557001--
HS119-00369chr2:20405190-2040668000dbSUPER
HS119-00370chr2:20407530-2040858001dbSUPER;HEDD
HS119-00371chr2:20738860-2074023001GeneHancer;dbSUPER;HEDD
HS119-00372chr2:23630550-2363198001--
HS119-00373chr2:23791240-2379297002GeneHancer;dbSUPER
HS119-00374chr2:23968230-23969700037GeneHancer
HS119-00375chr2:28491700-2849293003GeneHancer
HS119-00376chr2:38365700-3836662001--
HS119-00377chr2:75071910-7507304001GeneHancer;dbSUPER;HEDD
HS119-00378chr2:85185200-8518631001GeneHancer;dbSUPER
HS119-00379chr2:85935540-8593717006GeneHancer;dbSUPER;HEDD
HS119-00380chr2:88124090-8812502007--
HS119-00381chr2:89830310-8984714007--
HS119-00382chr2:89848510-8985610001GeneHancer
HS119-00383chr2:89856330-8985995004--
HS119-00384chr2:89860080-8988016001GeneHancer
HS119-00385chr2:90371450-9039464001--
HS119-00386chr2:91594990-9161613001--
HS119-00387chr2:92267400-9227406007--
HS119-00388chr2:92274430-923263300108GeneHancer
HS119-00389chr2:95474950-9547547000--
HS119-00390chr2:100615170-10061650002--
HS119-00391chr2:100683990-10068488002GeneHancer
HS119-00392chr2:101696300-10169748000GeneHancer;dbSUPER
HS119-00393chr2:109815630-10981646000dbSUPER
HS119-00394chr2:113915910-11391728005dbSUPER;HEDD
HS119-00395chr2:120095050-12009600001--
HS119-00396chr2:132994800-13299557002--
HS119-00397chr2:132995950-13299778003GeneHancer;dbSUPER
HS119-00398chr2:132997970-13300080003--
HS119-00399chr2:133002860-13300406000--
HS119-00400chr2:169134670-16913560005GeneHancer
HS119-00401chr2:179774080-17977533000GeneHancer;dbSUPER
HS119-00402chr2:189437870-18943886000--
HS119-00403chr2:223660570-22366199000GeneHancer