EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

EnhancerAtlas 2.0 integrated enhancers from 12 high-throupghput technologies including P300, Histone, POLR2A, TF-binding, DHS, FAIRE, Mnase-seq, GRO-seq, STARR-seq, CAGE, CHIA-PET, and MPRA. Users could click any enhancer to view its detailed information.

RPE | Homo sapiens

Full name: Retinal Pigmented Epithelial | Cell type: Pigmented epithelial cell | Tissue: Retina.

The tissue/cell type 'RPE' in Homo sapiens contains 3709 enhancers. Of these enhancers, 199 are associated with 242 SNPs.

SNPs

Show: chr4

ID	Coordinate	SNPs	TF binding sites	Other Evidence
HS168-02688	chr4:467060-467760	0	0	--
HS168-02689	chr4:656980-657550	0	1	dbSUPER
HS168-02690	chr4:657660-657900	0	0	dbSUPER
HS168-02691	chr4:658010-658460	0	0	dbSUPER
HS168-02692	chr4:699760-701910	3	0	GeneHancer;dbSUPER
HS168-02693	chr4:1037060-1041600	1	3	GeneHancer;HEDD
HS168-02694	chr4:1186150-1189450	0	7	GeneHancer;dbSUPER
HS168-02695	chr4:1283770-1284830	0	4	--
HS168-02696	chr4:1713720-1713850	0	0	--
HS168-02697	chr4:2044210-2044460	0	3	--
HS168-02698	chr4:2243170-2243770	0	0	--
HS168-02699	chr4:2262400-2263450	0	3	dbSUPER
HS168-02700	chr4:2536970-2538080	0	0	--
HS168-02701	chr4:2538300-2539550	0	3	--
HS168-02702	chr4:3294660-3296030	0	3	dbSUPER;HEDD
HS168-02703	chr4:3956460-3957050	0	0	--
HS168-02704	chr4:5752480-5754560	0	0	GeneHancer;dbSUPER;HEDD
HS168-02705	chr4:6271740-6272860	0	1	dbSUPER
HS168-02706	chr4:6784570-6785400	0	0	dbSUPER
HS168-02707	chr4:6911680-6912840	0	0	dbSUPER
HS168-02708	chr4:7068850-7069690	0	0	--
HS168-02709	chr4:7104650-7104990	0	0	--
HS168-02710	chr4:7940220-7941380	0	1	dbSUPER;HEDD
HS168-02711	chr4:8201130-8203780	1	3	dbSUPER;HEDD
HS168-02712	chr4:8429520-8430230	0	1	dbSUPER
HS168-02713	chr4:9154940-9155710	0	0	--
HS168-02714	chr4:10116430-10117730	0	6	dbSUPER;HEDD
HS168-02715	chr4:10117860-10118270	0	0	dbSUPER
HS168-02716	chr4:10458000-10458940	0	1	--
HS168-02717	chr4:15656250-15656820	0	0	dbSUPER
HS168-02718	chr4:15683520-15683860	0	1	dbSUPER
HS168-02719	chr4:17579190-17579690	0	0	--
HS168-02720	chr4:17616440-17616910	0	0	--
HS168-02721	chr4:22516650-22517150	0	3	dbSUPER
HS168-02722	chr4:24913470-24914430	0	5	--
HS168-02723	chr4:25378970-25379030	0	0	--
HS168-02724	chr4:37687350-37687820	0	0	--
HS168-02725	chr4:39046720-39047560	0	2	dbSUPER
HS168-02726	chr4:41215410-41216420	0	2	dbSUPER
HS168-02727	chr4:41362950-41364170	0	0	dbSUPER
HS168-02728	chr4:44727900-44728490	0	0	--
HS168-02729	chr4:47465180-47465600	0	0	--
HS168-02730	chr4:48907760-48908670	0	1	--
HS168-02731	chr4:52903940-52904390	0	2	--
HS168-02732	chr4:53588100-53588980	0	1	GeneHancer
HS168-02733	chr4:56262560-56263080	0	0	dbSUPER
HS168-02734	chr4:56815230-56815760	0	0	dbSUPER
HS168-02735	chr4:57253180-57253520	0	0	--
HS168-02736	chr4:57775210-57775760	0	0	--
HS168-02737	chr4:68410740-68411050	0	0	dbSUPER
HS168-02738	chr4:71571010-71571800	0	2	--
HS168-02739	chr4:75024000-75024310	0	0	--
HS168-02740	chr4:76650070-76650690	0	2	dbSUPER
HS168-02741	chr4:78078660-78079680	0	1	dbSUPER
HS168-02742	chr4:79473010-79473540	0	0	dbSUPER
HS168-02743	chr4:83294280-83294590	0	0	dbSUPER
HS168-02744	chr4:83811740-83812240	0	0	dbSUPER
HS168-02745	chr4:84405680-84406130	0	0	--
HS168-02746	chr4:88929480-88929700	0	0	dbSUPER
HS168-02747	chr4:95373150-95374250	0	0	dbSUPER;HEDD
HS168-02748	chr4:99182720-99183350	0	0	dbSUPER
HS168-02749	chr4:103422950-103423500	0	1	dbSUPER
HS168-02750	chr4:106393960-106395050	0	0	--
HS168-02751	chr4:108745950-108746770	0	1	dbSUPER
HS168-02752	chr4:109571950-109572490	0	0	--
HS168-02753	chr4:111117130-111119400	0	3	dbSUPER
HS168-02754	chr4:121842860-121843670	0	1	--
HS168-02755	chr4:122617780-122618010	0	0	dbSUPER
HS168-02756	chr4:122790770-122791430	0	1	--
HS168-02757	chr4:123073210-123074130	0	1	dbSUPER
HS168-02758	chr4:125632560-125633610	0	0	dbSUPER
HS168-02759	chr4:128886760-128887050	0	0	--
HS168-02760	chr4:128982560-128983700	0	0	--
HS168-02761	chr4:129207720-129208520	0	2	dbSUPER
HS168-02762	chr4:129733130-129734060	0	8	dbSUPER
HS168-02763	chr4:140004290-140005280	0	2	--
HS168-02764	chr4:140097240-140099100	0	2	dbSUPER
HS168-02765	chr4:140476390-140477250	0	0	dbSUPER
HS168-02766	chr4:141071520-141073050	0	13	dbSUPER
HS168-02767	chr4:141445440-141445820	0	0	--
HS168-02768	chr4:142142260-142142640	0	0	--
HS168-02769	chr4:146653950-146655030	0	1	dbSUPER;HEDD
HS168-02770	chr4:146856900-146859510	0	20	dbSUPER
HS168-02771	chr4:147096960-147097540	0	0	--
HS168-02772	chr4:152245870-152246990	0	2	--
HS168-02773	chr4:156297440-156297920	0	1	--
HS168-02774	chr4:157695420-157696000	0	0	GeneHancer;dbSUPER
HS168-02775	chr4:157891430-157891930	0	1	dbSUPER
HS168-02776	chr4:160024160-160025560	0	16	dbSUPER
HS168-02777	chr4:164415960-164416450	0	1	--
HS168-02778	chr4:166033320-166033890	0	1	--
HS168-02779	chr4:166248920-166249420	0	0	dbSUPER
HS168-02780	chr4:169401090-169401520	0	0	dbSUPER
HS168-02781	chr4:169753320-169754550	0	4	dbSUPER
HS168-02782	chr4:170191230-170192000	0	4	dbSUPER
HS168-02783	chr4:174090110-174091470	0	2	dbSUPER
HS168-02784	chr4:174411410-174413260	0	7	GeneHancer
HS168-02785	chr4:177241370-177242100	0	1	--
HS168-02786	chr4:177712790-177713310	0	0	dbSUPER
HS168-02787	chr4:178363000-178363400	0	0	--
HS168-02788	chr4:183837580-183838440	0	4	--
HS168-02789	chr4:185393430-185395530	0	17	dbSUPER;HEDD
HS168-02790	chr4:185458420-185458990	0	1	dbSUPER
HS168-02791	chr4:189659460-189659780	0	0	--