EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

EnhancerAtlas 2.0 integrated enhancers from 12 high-throupghput technologies including P300, Histone, POLR2A, TF-binding, DHS, FAIRE, Mnase-seq, GRO-seq, STARR-seq, CAGE, CHIA-PET, and MPRA. Users could click any enhancer to view its detailed information.


LNCaP | Homo sapiens

Cell type: Adenocarcinoma cell of the left supraclavicular lymph node | Tissue: Prostate | Disease: Lymph Node Carcinoma of the prostate.

Tissue/cell description report link(s): >>ExPASy.

The tissue/cell type 'LNCaP' in Homo sapiens contains 38911 enhancers. Of these enhancers, 6898 are associated with 13332 SNPs. SNPs Enhancers

Show: chrY>>chr1>>chr2>>chr3>>chr4>>chr5>>chr6>>chr7>>chr8>>chr9>>chr10>>chr11>>chr12>>chr13>>chr14>>chr15>>chr16>>chr17>>chr18>>chr19>>chr20>>chr21>>chr22>>chrX>>chrY>>All


ID Coordinate SNPs TF binding sites Other Evidence
HS121-38869chrY:13670-1504001--
HS121-38870chrY:18710-1976000--
HS121-38871chrY:98060-9923000--
HS121-38872chrY:273860-27449006--
HS121-38873chrY:900520-902550016--
HS121-38874chrY:1209560-121134000--
HS121-38875chrY:1458620-1460790010--
HS121-38876chrY:1484520-148686000--
HS121-38877chrY:1520640-152164000--
HS121-38878chrY:1553190-155356000--
HS121-38879chrY:2121080-212164000--
HS121-38880chrY:2368010-236835000--
HS121-38881chrY:2477520-247800001--
HS121-38882chrY:2497460-249987003--
HS121-38883chrY:2545230-254860005--
HS121-38884chrY:2559470-256103004--
HS121-38885chrY:2709670-271020000--
HS121-38886chrY:2713780-272264006--
HS121-38887chrY:6779020-678012002--
HS121-38888chrY:7673120-767790001--
HS121-38889chrY:9238830-929635006--
HS121-38890chrY:9327260-9357270028--
HS121-38891chrY:14532250-1453334003--
HS121-38892chrY:14774640-1477657000GeneHancer
HS121-38893chrY:14838730-14847540017--
HS121-38894chrY:14885860-1488740001--
HS121-38895chrY:14930550-14945610024--
HS121-38896chrY:15016890-1501944001--
HS121-38897chrY:15587910-1559113002--
HS121-38898chrY:15591200-1559139000--
HS121-38899chrY:21230680-2123782004GeneHancer
HS121-38900chrY:21675030-21719240087--
HS121-38901chrY:21729370-21749090018GeneHancer
HS121-38902chrY:21753850-2175528000--
HS121-38903chrY:21905130-2190627000--
HS121-38904chrY:21906440-2190655000--
HS121-38905chrY:23573440-236632200142--
HS121-38906chrY:27606320-2761905008--
HS121-38907chrY:59214120-5921490004--
HS121-38908chrY:59357200-5935832001--
HS121-38909chrY:59359510-5936000001--
HS121-38910chrY:59360120-5936050000--