EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM154-09685

Organism

Mus musculus

Tissue/cell

V6.5

Coordinate

chr4:128924290-128925360

Target genes

Number: 15
Name	Ensembl ID

Adc	ENSMUSG00000028789
Ak2	ENSMUSG00000028792
Rnf19b	ENSMUSG00000028793
Tmem54	ENSMUSG00000028786
Hpca	ENSMUSG00000028785
Fndc5	ENSMUSG00000001334
S100pbp	ENSMUSG00000040928
Yars	ENSMUSG00000028811
C77080	ENSMUSG00000050390
Sync	ENSMUSG00000001333
Rbbp4	ENSMUSG00000057236
Zbtb8os	ENSMUSG00000057572
Zbtb8b	ENSMUSG00000048485
Marcksl1	ENSMUSG00000047945
Eif3i	ENSMUSG00000028798

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Ascl2	MA0816.1	chr4:128924619-128924629	AGCAGCTGCT	+	6.02
Ascl2	MA0816.1	chr4:128924619-128924629	AGCAGCTGCT	-	6.02
RUNX1	MA0002.2	chr4:128924803-128924814	GTTTGTGGTTT	+	6.02
ZNF263	MA0528.1	chr4:128924530-128924551	TCTTCCTTCCCCATCTCCCCC	-	6.38
ZNF740	MA0753.2	chr4:128924396-128924409	CTACCCCCCCCCC	+	6.13

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

mSE_07184	chr4:128921461-128925643	Intestine
mSE_08207	chr4:128923502-128925653	Kidney

Enhancer Sequence

AGGTAAACAC AGCTAGGTGG GATGGGCCCT GACCCAGGCC ATTCCCTCAC CTTCAGCACT 60
TTAGCTTGGC AGTATAGGAA GATAAACTTC CAGCAGCCGC TGGCCTCTAC CCCCCCCCCC 120
CGCCCCAGCA GAGACTAAAG GTCTCCCCAC CAAACTGATG ACAGAAACAG GAGATGGGGG 180
AGAAGCCAAA CAAGTGGCCA AAAGTACAGT GACCTTAACA GGGATATAAG GCTCCCAGTT 240
TCTTCCTTCC CCATCTCCCC CATCTCTCAG GCTTCCCACC CCTTAGAGTC CAGGGAGAGC 300
CATGGGCTCA AAACTTCCAA ACACTAGGAA GCAGCTGCTG ACTTCTCCTG GCACAGCAGC 360
ACAGGCAAAG GCTCTCCACC TCACTTGAGC CTCAGTTTCT CCATTTTCAA CACAAGCAGG 420
TTACTACGGG GGACAAGGGA CTAGGGAGAG TGGTGAGTGA TGAGGAGAGG ACTCTGGTTC 480
AGGAAGGTGA TCTCACCACC TCAGGAGGTG GATGTTTGTG GTTTGGCCCA GGTAAGGGAG 540
GGGAGGGGGG GTGCGGGGTG TGGAGATGGG AAAAGCTAAC ACTGGTAACA ACCTCAAGCA 600
AAGGACTCCA AGCTGAGTAC TTTGGGGAGC TGGAACCAGG ATCTACCTGG AGGGCAAAAA 660
GAACTCCTTT TGAGTAGGCT GACCTTAAAG ACCCAAAGAG ACCGACACCC CAAGACCCAA 720
GGCCACCTGC CTCTCCCATT GGCCCTGGGC CAGTGTCAAA TCTCTGACCC CTTGACTCAG 780
CAGAGGGCAC AACTTAGGAG AAGGAAAGTG TCTTTCCACC AGGAGGGCCA GCCAGCCAGC 840
ACTTCCTGCG TAAACTAGGG GATCCCTGCC CAGATGGGGG TCTCTGCCTC TCACAGTTGG 900
ATAGGTTGTG CCCCTGGAGC GGCGCAGGAC CTATCTTGGG GTGCCCTGGG CTCTTCACTT 960
CCCCCAAAAC CATTGCCTAG GAGACAAGCC GTCCACATTA CAGCCGACCC CACCAGAGGG 1020
ACCCACCCTG CCACACCCAT GGGCGCGCTC GACCCAGGTG CCAGGCCAGC 1070