EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM154-06970

Organism

Mus musculus

Tissue/cell

V6.5

Coordinate

chr19:4809820-4811170

Target genes

Number: 16
Name	Ensembl ID

Rhod	ENSMUSG00000041845
Pcx	ENSMUSG00000024892
Lrfn4	ENSMUSG00000045045
Spnb3	ENSMUSG00000067889
Rbm4b	ENSMUSG00000033760
Rbm14	ENSMUSG00000006456
Ccs	ENSMUSG00000034108
Ctsf	ENSMUSG00000083282
Actn3	ENSMUSG00000006457
Zdhhc24	ENSMUSG00000006463
Bbs1	ENSMUSG00000006464
Mrpl11	ENSMUSG00000024902
Slc29a2	ENSMUSG00000024891
B3gnt1	ENSMUSG00000047379
Rin1	ENSMUSG00000024883
Cd248	ENSMUSG00000056481

TF binding sites/motifs

Number: 6

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

CDX2	MA0465.1	chr19:4810252-4810263	AAGCAATAAAA	+	6.32
NR2C2	MA0504.1	chr19:4809842-4809857	TGACCCTTCACCCCC	-	6.01
SP1	MA0079.4	chr19:4811106-4811121	GAGGGGCGTGGCTAA	-	6.82
SP4	MA0685.1	chr19:4811104-4811121	GTGAGGGGCGTGGCTAA	-	6.53
ZNF740	MA0753.2	chr19:4810328-4810341	CCCCCCCCCCCCC	+	6.03
ZNF740	MA0753.2	chr19:4810329-4810342	CCCCCCCCCCCCC	+	6.03

Enhancer Sequence

GTTCCTATAA ATGCACATCC TATGACCCTT CACCCCCCTC TTTGAAAAGA CAAGGAATGG 60
CCCAAAGTTG TGACTTTCCA GAACAGCAAA TGAACCCTTG ATGAGAATGA GCAAGCACCT 120
ATACCCACAT GTAGTTCCTG TCCTCAAAAT TCCTTACAAG GCACAAGCAG ATATGAATCC 180
AACAACAGCA CAACTAGGGA ATAAACAAGG CCTCACTCCC AGGGTGCACT GTTGAAAATG 240
ACAGGGCAAA GTTAACTCTC ATCAGTGAAA CCCACATCGG TCTGGGTGTC TCATAAAATC 300
TTGCCAACAT AAAAAAAGCA GGTATTTGAA AGATAAAGAG ATAAAACCCC AACATATGAA 360
AATCAACAGG GTCTGAAAAA GACATTTCCT CAAAGGAAAT AGCAAACTAG CAAGCTGTCC 420
TAAGAATTAT TCAAGCAATA AAAAGTACTA ACTAAATAAA TGGTGTTAAA ACCAAGTTTA 480
ATAGAAATCT CACACGCCCC TCTCAACACC CCCCCCCCCC CCAGCCAGAG TATTCCCCTT 540
TGCAATCTCA CCAAGCTAAT AAACATCTGT GCCCGGAGGC ACCAGCTTAG CAAGTAAAAG 600
GCTAACGAGG GAGAGGCTTA ATAGCCCCCT TTCACATGCA AAAATAACGC AGAAAACCGG 660
GGCTTCCACT TGTTAAGTTG TAAAACCCAA CACAAAGTGG AGGGTGGAGG AAAAGAATTA 720
AAAAGCACAA AACCGCCAAG GCTAACCCAT CGAATACTGA AAGGTCAAAG GGGTTCCGAA 780
AAGGCCCCTC CCATGCCCAC AAGCAGATTC ATTCCAGACA ATACTAAAAA AGCCCGAACC 840
CGAGAAACCA AGGGCCCGCT ACCTTCCGGG AAGCATCGGG AAGGAACGCC AGAGCGGCCT 900
TGGGGCTTCA ACCCAACCTT TTCCCTTTTC CCTCGATCTG ACCAAATTCT GGAGAGGAAG 960
TGGGGAAGTG GCGAACTCTT TTCACCGCTC CATAATCCGG TTGGTGCCCT TCCCTTTCCA 1020
TTTCATTTTG GTGCCAGGCT CATGCAACCA GGAAAAGGCG CCTCCTCCCA ACCCCGCACA 1080
CTCGCAAATC TCTGGCGCGT CCCCAGCCCC GAGGCTTCGG CTTGCAGTGG CCACTGCACC 1140
CGCCCGGAAC CGACTCCTCC CACTTGATGA ATGTTGCTGG GACCGCAGGG GAGAAGGGTG 1200
GCTCTACCCA ACTCGCCCCC AGCACCTTAG GCCCCGCTCC TGCACACTTC CCCATCATTC 1260
CCAACCCTGA GGACCAACCC CAGAGTGAGG GGCGTGGCTA AGAGGCAGAG AGCACCGCGC 1320
GTGTCCCCTC CCGAGCGCGC TCCCGCGTTA 1350