EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM151-00023

Organism

Mus musculus

Tissue/cell

Treg_cell

Coordinate

chr1:21323370-21324050

Target genes

Number: 8
Name	Ensembl ID

Tram2	ENSMUSG00000041779
Tmem14a	ENSMUSG00000025933
Gsta3	ENSMUSG00000025934
Gm4956	ENSMUSG00000025936
Khdc1a	ENSMUSG00000067750
Gm16329	ENSMUSG00000086194
Khdc1c	ENSMUSG00000041722
Gm7658	ENSMUSG00000082935

TF binding sites/motifs

Number: 6

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

PKNOX1	MA0782.1	chr1:21323940-21323952	TGTCAGCTGTCA	-	6.04
RUNX1	MA0002.2	chr1:21323886-21323897	TTCTGTGGTTT	+	6.32
TGIF1	MA0796.1	chr1:21323940-21323952	TGTCAGCTGTCA	-	6.27
TGIF2	MA0797.1	chr1:21323940-21323952	TGTCAGCTGTCA	-	6.37
ZEB1	MA0103.3	chr1:21323482-21323493	GGGCAGGTGCG	-	6.02
ZNF263	MA0528.1	chr1:21323778-21323799	GAAGGAGGAAGTAAAGAGGGA	+	7.03

Enhancer Sequence

TGCTTCCTAG CAGCCCCAAG ATCCCAAGCC CAGGAACCCT AAGTCCTCGC TCTCTCTCTC 60
CTCCCCAACT ATTGGCAGCT CGTATCTTTA TTTACCAATC AGAATTAACT GGGGGCAGGT 120
GCGTAGAAGC TATGTGCAGA CTCTCTCGTT GTAAACAATT TTGGGGTGGG GGTGGGGCGA 180
AATTATCATC AAAATACAAG CAGCTACAGC ATACAATACA AATAAATCTT AAGAAAATTA 240
ACAGTTTGGT AAAACTATGT CCCGACCCGC AGGACTCAGT TATTCTGGGG GCGGAGGGGT 300
CCGAGGGGGA CCATGCCTGA AAGAGAAACG GGCGAGAAAG AAGGAGCGAG ACTAAGCAAT 360
GATTGTCAAG GTCTGTTTAT TGTGAGCAAG GTTACAGAAT ATAAGAAAGA AGGAGGAAGT 420
AAAGAGGGAG AAACCTGCGG GAGCCTCAGC CCGGGGGCGG GGGTGGTTCT ACATAACTGC 480
CTGGGAATAC ACTATCTACT CTTAGCTCAG GGGACATTCT GTGGTTTTTC TCGGAAAGTT 540
TGCAGAGACT ATTATCTGAT CTTGATGTTC TGTCAGCTGT CATTTCAAAA GGTCAGAAGT 600
TTCTCAAGAA GGGAGGGGAA CTTTGGCTCA CAGTACAATA TCCATCCCCA ACAAAACTAG 660
TTATAAAAAT CAAGAATTGA 680