EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM150-16025

Organism

Mus musculus

Tissue/cell

Thymus

Coordinate

chr9:72547520-72547970

Target genes

Number: 7
Name	Ensembl ID

Zfp280d	ENSMUSG00000038535
Mns1	ENSMUSG00000032221
Tex9	ENSMUSG00000090626
Rfx7	ENSMUSG00000037674
Nedd4	ENSMUSG00000032216
Pygo1	ENSMUSG00000034910
Dyx1c1	ENSMUSG00000092192

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Klf1	MA0493.1	chr9:72547687-72547698	TGGGTGTGGCC	-	6.62
LEF1	MA0768.1	chr9:72547848-72547863	CAAGATCAAAGAAAA	+	6.34
MYC	MA0147.3	chr9:72547699-72547711	GGCCACGTGCTG	+	6.37
Mecom	MA0029.1	chr9:72547628-72547642	AAGACAAGATTAGA	+	6.19
TCF7L2	MA0523.1	chr9:72547848-72547862	CAAGATCAAAGAAA	+	6.26

Enhancer Sequence

TCTATGTAGA ATTGAGCCAA GGTTTTTAAG GTTATGGCCT AAAAACTTTG GGATAGGGAG 60
CCTGCCCGAG CTAGCTGTTG TAAACTTTAC TGCACTGTGA TGGCTGACAA GACAAGATTA 120
GACCTGGGCT TGGGAGCTTG GCCAAGCAGG AGGCTTGGCA GCATTGCTGG GTGTGGCCAG 180
GCCACGTGCT GAGGTTGAGA GCAAGATTAA GGGAAGGGAA GGCTGGGGGG TGGTGAAGCA 240
GTTATCTGTC AGCATATCTT CGGAGTGTCC AAAGCCTTGC TGGTATCTTC TTCAGGCTTT 300
TCTTGTGGGA AGGTTGTGAC AGGTGCTTCA AGATCAAAGA AAAATGTTTG AAAACAGCCT 360
AGGAGCTGTC TAGTCTGTGA TCTGATCTGG GGGCTGTCAA CATGGAAGTG GTTGCTGAAA 420
GCAGCCTCAG CTTTGTTAAG ATTTAAAAGG 450