EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM150-15751

Organism

Mus musculus

Tissue/cell

Thymus

Coordinate

chr9:45004070-45006110

Target genes

Number: 18
Name	Ensembl ID

Arcn1	ENSMUSG00000032096
Ift46	ENSMUSG00000002031
Mll1	ENSMUSG00000002028
Atp5l	ENSMUSG00000038717
Ube4a	ENSMUSG00000059890
Cd3g	ENSMUSG00000002033
Cd3d	ENSMUSG00000032094
Cd3e	ENSMUSG00000032093
Mpzl2	ENSMUSG00000032092
Mpzl3	ENSMUSG00000070305
Amica1	ENSMUSG00000048534
Scn2b	ENSMUSG00000070304
Scn4b	ENSMUSG00000046480
Tmprss4	ENSMUSG00000032091
Il10ra	ENSMUSG00000032089
Tmprss13	ENSMUSG00000037129
Fxyd6	ENSMUSG00000066705
Dscaml1	ENSMUSG00000032087

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

IRF1	MA0050.2	chr9:45006057-45006078	TGAATGAAAGAGAAAGAGAGA	-	6.08
RREB1	MA0073.1	chr9:45004847-45004867	CCCCACCCCACCCCCTGCCC	+	7.21
Rarb(var.2)	MA0858.1	chr9:45005608-45005625	ATGTCAAATAGAGTTCA	+	6.02

Enhancer Sequence

TGGCAGGTAA GGCGACAGGA AGGGGTTATG GAGGGGTGCT TCATCATGGC GGGGTGCTTC 60
ATCATGGCGG GGGTGGGGGA GCTGCAGTGG TGCAGCATTT TAAGGTGCAA TCAAAGGTGT 120
CAGTGGCAAC AGCCATGTTG GCTTCCAAGT AGTCCCGCCC TGTGACTCCG TTTTCAGGAT 180
GTCTGTCCAG CAAAATAGGC TAGGTACCAG CTTCACACAT AGGAGAAGCA GTCTTTACCA 240
GGTGTAGGCT TTCTTTTAAC CTAACCTCAG CCCAGCTGCT ACATTAGAAA CCACCGTGCC 300
TTGTAATAAA CCACATAAGT GCTGACCTGT TGGCAATTAG AGTAGAGAAT CCTACCCATT 360
CCAAGGTATA ATAGCTCCAG GGCAAGGCCT GGGGGCGGGA GAGAGGAGTC AGATAACCCA 420
CTGTTAATCC AGCTACTGAG CCTGCTGTTC AGTTCTGTTA TTTAAGAATC AACCTTTGTG 480
TTTCTGCCAG GCCCTTAACT TCGGGTAGAG CCTGGAGAGG GAAGACCAGG GTAGAGAGGC 540
AAGAATCCCT GTTTCATGAT GGAGGTGTGG TACAGGGTTT GCAAGATCTC TGCCCTCTAG 600
CTACACTGTG GGCCAATGTC TTCGGAGGAG CTGACTGTAG ACACCTGGCT TCCTCCTGAG 660
GCCTTTTGTT CCAGGTGGCT CTGTTGTGAG CTCACTCTTG CACAGCCAAC AAACCCAGGG 720
AAGGCAGTCC CCGCCCCTCT ATTTCTGAAT TCTTGGTTGT TCTATTTTGC TCAGCTCCCC 780
CACCCCACCC CCTGCCCTAA CAACCTGTGC CCACTTTCTC TTTCCAGAAC GGTCAGATGA 840
AAAGGTAGCT TCCCGAAGAG ACCCAATGGT AGTGTGTGTG TGTGTGTGCA TGCATTTGTG 900
TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG TGTGTGTTTA TGAGGCTGCA 960
CAGGTTAGAC TTCCAGCCTT CCATGGATTC TTGGGCACCT GCTTGTTGGG AGGGCTCATG 1020
GATGCTAGAG CTTAGATAAG TTCTCTAAAT AACGTTTACC CAAACCAGGT AGCTGCCACC 1080
CACAATGCAG TCTGATGTTT ATAAGAGAAT TCCACAGAGT TGATGCTGTC TTAAAACAAA 1140
ACAAAACAAA ACAACAACAA CAAAACTCAA CTTCCTTTGT TTGTCCTGAA TTGTCTTTAA 1200
ACATTAAGAT ATAGGAAGTG GTATAAGGGA AGAGGGGATT TTATAGAGAG GGCCTGGCTC 1260
CCCAGCTGAG CTGCTAAGCA ATCCTGGGCA ATTCTGTGTC TCCTGACCCT AGCTTCCTTC 1320
CCACTTTGCA ATGTGGGTTT GAATCAGCAC AAACACTCCA CCTGCTACGA GCACCCTTCC 1380
AAGCCCTCAA AGACCTCAGC TGGTCCTCTC AGGATCCCAT TGCTGTTTAT GGCCCCCTTG 1440
GTTGATTTTT GTGGTCTAAA GGGTCTCAGC TGCTCTGGTT GGGGTGGGGC CCACTGTATC 1500
CATTCTTCCT GAGAAGACGT GCTGGCTGGA CTTCAGTCAT GTCAAATAGA GTTCAAGTAC 1560
ACCGGCAAGG TTCCCTGCAA GGGCAGAAGG GAGCAGCCTG CTTTGTTCCA GGTGTCTCAG 1620
GGATAGCCAG CCTCTGGTGG CTCCTTTGGC TGCTGCTGCT GATCTGCCCG CAAAAGACTC 1680
AGTGACTCTC TGATGGCTTT CCTGGGAACT CTGAACTTCA GAGCCTATAA ATAGCATTCT 1740
GGTGGCGCTT CCGGGACTTC TCTGCATTAT TACCTTGTGG TTGCATAACC TAGTGTTCTT 1800
CTCCCACTTT CCTGCCCACT CATATAACTC TGCAAGTGCT TGGAAAGTTT CCTCTTGCTG 1860
GGATGCTACT GTTAGAAGAG GCATCTTGAC AGGGGATGGA GCACGGACTA TGGCATCCTG 1920
CCATTGAGGT CTGAATCCCA CCTCTGTACT CAAATTATTT GACCATCAAG AGCCTCAATT 1980
TCATGTGTGA ATGAAAGAGA AAGAGAGAGA CACTGAGAGA CAGAGAGAGA GACAATGAGA 2040