EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM150-15749

Organism

Mus musculus

Tissue/cell

Thymus

Coordinate

chr9:44992470-44993890

Target genes

Number: 19
Name	Ensembl ID

Ddx6	ENSMUSG00000032097
Arcn1	ENSMUSG00000032096
Ift46	ENSMUSG00000002031
Mll1	ENSMUSG00000002028
Atp5l	ENSMUSG00000038717
Ube4a	ENSMUSG00000059890
Cd3g	ENSMUSG00000002033
Cd3d	ENSMUSG00000032094
Cd3e	ENSMUSG00000032093
Mpzl2	ENSMUSG00000032092
Mpzl3	ENSMUSG00000070305
Amica1	ENSMUSG00000048534
Scn2b	ENSMUSG00000070304
Tmprss4	ENSMUSG00000032091
Il10ra	ENSMUSG00000032089
Tmprss13	ENSMUSG00000037129
Fxyd6	ENSMUSG00000066705
Fxyd2	ENSMUSG00000059412
Dscaml1	ENSMUSG00000032087

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

RREB1	MA0073.1	chr9:44993734-44993754	CCCCCCCCCACACCCAAAGC	+	6.05
RREB1	MA0073.1	chr9:44993730-44993750	CCCCCCCCCCCCCACACCCA	+	6.06
ZNF740	MA0753.2	chr9:44993730-44993743	CCCCCCCCCCCCC	+	6.03
ZNF740	MA0753.2	chr9:44993732-44993745	CCCCCCCCCCCAC	+	6.92

Enhancer Sequence

CCTTGACTGG AAGGTACATT AGGGAGGAGC AGAGTGGACT GGGGTCAAGC AGGCGATTGG 60
GGACAGAGAG GGGCTGCTTT TTCTGAAAGT CAGGCTGGCT GGAGGCAGGC AGCCAATTTT 120
AAAAATAAAT CATTTCTGTA GTGTGTGCGG GTGGGCGGGC GTGTGAGCAT GTGTGTCCCT 180
GACTGGAGGT CAGAGGACAA CTTTTGGGAG TTATTTTCTG GTGTTTGCTA CAGTAATGAA 240
ACACTAACGA ACATAGCTGC TCTCAGGTTG GACCATCTCA GGTGGAGAAG AAATGATTTA 300
TACATTGCAT AACCACCCTG GTGCTCTCAA GGATCAAGGT AGTGTCTGAC TTGTGGATAC 360
CCACTGTTAC TACGAGGAGG ACCTGGTCAG CCAGAGAACT GGAGTCCCAT CCCAGCCTCT 420
GTTCCTGCTT GCCTTGCCTG GGCTTTGAAC CTCAGTGTCC AACTGTAGAA TTAAGGGTTC 480
AAGCAGAAGG TCTCTGTGTG CCATCCAATG GGTGGTGTCT GCTGCGAGTG CAAATGTCAC 540
CTGAGCGCTA AGTAAGGCTC CCCAAGGGTG GGCCATGCCC TGGTTGTACA GGTACTACGT 600
GCCCTGGGTC CCTGCTCTGC CTGCTACATG CTCTTGGTTT TTAATCCAGG TTCTGCACAT 660
AAGGTTTCTC ATTGTTCTTT GTAATGCTTA AAGGCATTTC ATACTTGAGG GGCTCAGTGG 720
ACTCCTATCT GGGTGCACAG GTTCCCTGGA GGAGCCATGA TCCCCATCCC TGACTCCTAA 780
GCTTGTCTTC TATGCTCAGC TCCGTGCTGT GAAAGCAGTG GCCCGTCTCT GCTGTAACTC 840
TGGAAATCAT TGTCGCAGAG TGTGCTGCCT GAGATGACAT CCGGGTTCAT GAAGACTGAG 900
CTGGGGTGGG CAGAGAGTTC TCTCTGCCCA GTCATCTTCC CTAGTACCCC TTTTGCCTCC 960
AATCTCTACA GGCAGAAATA CTCTCTAGCC TGACAGCTGT AGGGCTGCAC AGACATCCAG 1020
CCAGCCCCCT CACCCTGCTC CACCACCAGC TGTCAGTTTG CAGGAGATGG GAAGGAGGCA 1080
GCTGGGGGTG GGCACCTCTG CCACTGCCTG TGTGGGTTTG GAATGGGTGC CACGTGTGTA 1140
GCAACCATCT GGAAGAGAAG CCATCTGGGA GAACGGAGGG GTGCGCTCAC CTTCCCCTTG 1200
CACTTAGAAG GCTACCTCCT AAGCAGGCAT GAGAATACAT GAGGCATGAG AATTCATTTA 1260
CCCCCCCCCC CCCACACCCA AAGCTCTGTG CAGATCACCT GCCTATCACT GTGCATGGGA 1320
GGACTGGTGC ATGGTGAGGG CTGTAGCTGG CTGAGGGGGT GAGGGTGAGA ATGGGGGCTC 1380
AGAGGGGAGA GGGGTGGGGT GAAAGCTGTG TGGGGGCTGT 1420