EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM150-15714

Organism

Mus musculus

Tissue/cell

Thymus

Coordinate

chr9:44370490-44371690

Target genes

Number: 20
Name	Ensembl ID

Cbl	ENSMUSG00000034342
C2cd2l	ENSMUSG00000032120
H2afx	ENSMUSG00000049932
Vps11	ENSMUSG00000032127
Slc37a4	ENSMUSG00000032114
Trappc4	ENSMUSG00000032112
Rps25	ENSMUSG00000009927
Ccdc84	ENSMUSG00000043923
Upk2	ENSMUSG00000041523
Bcl9l	ENSMUSG00000063382
Cxcr5	ENSMUSG00000047880
Ddx6	ENSMUSG00000032097
Phldb1	ENSMUSG00000048537
Arcn1	ENSMUSG00000032096
Ift46	ENSMUSG00000002031
Mll1	ENSMUSG00000002028
Atp5l	ENSMUSG00000038717
Cd3g	ENSMUSG00000002033
Cd3d	ENSMUSG00000032094
Cd3e	ENSMUSG00000032093

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Mafb	MA0117.2	chr9:44371080-44371092	AGTCAGCAGTTT	-	6.22
Nr5a2	MA0505.1	chr9:44370510-44370525	GAGTTCAAGGTCAGC	+	8.73
RREB1	MA0073.1	chr9:44371495-44371515	CCCCCACCCCCCACCCCACC	+	6.41
RREB1	MA0073.1	chr9:44371498-44371518	CCACCCCCCACCCCACCCCC	+	6.74
RREB1	MA0073.1	chr9:44371491-44371511	CCACCCCCCACCCCCCACCC	+	7.47

Enhancer Sequence

AGAGACAGGT GGATGTCTCT GAGTTCAAGG TCAGCCCCAG GACAGCCAGA GAGCATCTGT 60
CTCAGCACAC AAAAACGAAA GTAATGGAGT GCCAGTCTGG TGTGTGTGAG GTTCATGCCC 120
CAACACATAT GCTTTTTTTT GTTTTTGTTT TTTTGAGACA GGGTTTTTCT GTATAGCCCT 180
GACTGTCCTG GAACTCACTC TGTACACAAG GTTGGCCTCG AACTCAGAAA TCTACATGCC 240
TCTGCCCCCA AGTGCTGGGA TTAAAGTGCA CCATAATGCT TGGCTCCCTC TCTCCCCGCC 300
CCCCAACCCC CATAGGGTTT CTTTATATAG CCCTGACTGT CCTGAAACTC ACTGCATAGA 360
CCAGGCTGTC TTTCAGGTCA CAGTGAACCC TTGCTTCTAC CCATTGTTGT TAAAGGTGGG 420
CCGGCATGAG GTCATACTTT ACATGATTTG ACAGAAGGAT CTGAGGATGC GAAGGACAAG 480
AGACAGAGGA TCAGAAAGAT TCACACACAA TGCCTGAGGG AGGACTGTTT CCGGAAAGCT 540
GCCACTGTGT CTTTCCTCAG CACCTAGCTG TCTCGGGTCA GGTGGGCCAG AGTCAGCAGT 600
TTCTGACCCC AGTCGGAGCC AAGCAAATGC ATGCTCACCG GCAAGGCTCA CGACAGTTAC 660
CACGACGACC TTCAGAGAAC TGCTGCCTCA TTTCTGCCTT CCAGATCTGA CGAAAATTCC 720
TCTCTTGGTC AATGCTCACC TGAAACCATT CAGGGGGAGG GGATTCTGGG AAACAGCTCT 780
GATGTAGCAA TGTTCAAACA CGGCAAACCA CAGGGCTGTG TAAAATGTGA ACCTCAACGG 840
ACCGTGAGAA AACCTACAAA GATGGGAGGG GTCCTTTTGT AAGTCTAAAG CACAAGGCGT 900
GGGTTTTTAG GAATCCCCCT CAAACCTTCT ATCACGTCAG CGTCAGCGCT TTACCTGTGT 960
GATGGGGGAG GGGTGGTGTT TTTGTGAAAT TGCTACGATT CCCACCCCCC ACCCCCCACC 1020
CCACCCCCCG GACAGGGATT CTCTATGTAG GCCTGGCTGT CCTAGAACTT GCTGTAGACT 1080
AGGTTGGACT GGAAATGCCT CTGCCTCCTG CGTGCTGGGA CTAAAGGTGT CCGCCGTCAT 1140
CCCCCGGCCT GCAATGATTT TTCGTATGAT TTAAAAGGAT GGTTCTGTGT TTAACAACAG 1200