EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM150-15554

Organism

Mus musculus

Tissue/cell

Thymus

Coordinate

chr9:21261060-21261940

Target genes

Number: 22
Name	Ensembl ID

Eif3g	ENSMUSG00000070319
Dnmt1	ENSMUSG00000004099
Icam1	ENSMUSG00000037405
Raver1	ENSMUSG00000010205
Cdc37	ENSMUSG00000019471
Pde4a	ENSMUSG00000032177
Keap1	ENSMUSG00000003308
Atg4d	ENSMUSG00000002820
Kri1	ENSMUSG00000035047
Cdkn2d	ENSMUSG00000066860
Ap1m2	ENSMUSG00000003309
Slc44a2	ENSMUSG00000057193
Ilf3	ENSMUSG00000032178
Qtrt1	ENSMUSG00000002825
Dnm2	ENSMUSG00000033335
Tmed1	ENSMUSG00000032180
AB124611	ENSMUSG00000057191
Carm1	ENSMUSG00000032185
1810026J23Rik	ENSMUSG00000048429
Yipf2	ENSMUSG00000032182
Smarca4	ENSMUSG00000032187
Ldlr	ENSMUSG00000032193

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

BCL6	MA0463.2	chr9:21261827-21261843	GGGCTTTCCAGGAACG	+	6.15
ZNF263	MA0528.1	chr9:21261232-21261253	CTCCCTCTTCTCCCCTCCCCC	-	6.36

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

mSE_10413	chr9:21258947-21262169	Embryonic_stem_cells
mSE_11296	chr9:21258880-21262286	Placenta

Enhancer Sequence

GTTCAGTTGT GTGTCTTCCT GCCTGTTCCT CCAAGGAAAA GCCTTTGCCC TGATTCCTAT 60
CACAAAAGAT CAGCTTTGCC TGTTCAGGTT CAAGTCTATC TCTGTGGTAG CTTGTAACCT 120
GGGCCACATG TCTGAGAAGA TGTGCATGGC TCCAAGACAG CCATACTCTT CTCTCCCTCT 180
TCTCCCCTCC CCCCTCTGCC TTTGTAGACC AGGCTGGCCT GGAACTCACA CCTGCCTCTG 240
CCTCTGAGTG CTGGGAATAA AGGCCTGCGC CACCAATGCC TGGCAGCTAT ACTAATTTTT 300
ACACCTAGTT AGGGAGACCA CACAGGGATA ACTGTGGGCC AGCCATGCAG CAGTGCTGAT 360
GGTGACCTAA CTTGGGATTT TTGGCCTCTA CATTAGCTGG TATAGGCATT AGCCACCATG 420
GCCATTTTCT TCCGTGCTGG GAATCCTGCT GGGGAAGCTC TCTACCAACT GAGCCACACC 480
CCAGCCCTTG TTTTATTTTG AGACAGCTTC TTGCTGTGTA GTCCTGTCTG GCCTGCCTCA 540
GCTTCCAGGG TACTGGGGTG ACTGGCGGTT GTTTGTTCGG TTGGCTTTGA ACTTGATCCT 600
TCCCCAGTCT TTCTTGTGGC TCTTTTGCCA TGGGCAAGAT TGTCTGAAAT ACAATGCAAG 660
GAGGGCTTAG TGGAAGTGCT AGAGCAGATT GTGTGTACAC AGCTCTGTGT CTTCCTACTT 720
AGTTCAGGTC CCCTGCAGAC CTTGGGCTGC AGAGCCTCGG TAGCCGAGGG CTTTCCAGGA 780
ACGCAGCTGG GGTTGGTGCG TTTGTTAAAA CTTGCAGGAA ACAGTTGCCT AGTGCCTGTG 840
GTCACCAGCA GCACTGAGTC ATTTCTGCTG CTTTCTCTTC 880