EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM150-15524

Organism

Mus musculus

Tissue/cell

Thymus

Coordinate

chr9:20779650-20781040

Target genes

Number: 17
Name	Ensembl ID

Zfp426	ENSMUSG00000059475
Fbxl12	ENSMUSG00000066892
A230050P20Rik	ENSMUSG00000038884
Angptl6	ENSMUSG00000038742
Ppan	ENSMUSG00000004100
Eif3g	ENSMUSG00000070319
Dnmt1	ENSMUSG00000004099
S1pr2	ENSMUSG00000043895
Mrpl4	ENSMUSG00000003299
Icam1	ENSMUSG00000037405
Icam4	ENSMUSG00000001014
Icam5	ENSMUSG00000032174
Zglp1	ENSMUSG00000079681
Fdx1l	ENSMUSG00000079677
Raver1	ENSMUSG00000010205
Pde4a	ENSMUSG00000032177
Cdkn2d	ENSMUSG00000066860

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

REL	MA0101.1	chr9:20780308-20780318	GGAAATCCCC	-	6.02
Stat6	MA0520.1	chr9:20780711-20780726	TGCTTCCTGAGAACC	+	6.08

dbSUPER

Number of super-enhancer constituents: 3
ID	Coordinate	Tissue/cell

mSE_05707	chr9:20779904-20782308	E14.5_Limb
mSE_10188	chr9:20779798-20784244	Embryonic_stem_cells
mSE_11219	chr9:20778847-20782139	Placenta

Enhancer Sequence

TCAGTCTCCT GAGCACTGGG ATTAAAGAAA TAAGGCATTT TACCCAGCAC AGCCCACCCC 60
TAATTTCTAT CAGAGCATCT GACTTTATCA TCGGAAATGA TCTTGTTTTC CACAGTATCG 120
TGTGAGGCCA GCTACCAAGT TCACCCTCAG CCTCTCTTGC TTGGTGCAAG CGAGGCAGGC 180
GCATGAATGA ATGAAAGAGC CTGAAATTGG GGGGCTCGTT CGCATGCAAA GCATGGGGAC 240
ATCTCCTGGC AGCACCCCTA CCCTACCACT ATAGGAAGCT GAAGCCGGGC GCGTCTCCTT 300
GGCGACAGTA AGACCCGCCT GGCTCAGGCA GCACTCTCCA GCTCCTTATC AGGCCGAGGA 360
ATGCGTGGTA TCCACACTCG CTTGCGCTGG GGCGGCGCCA TCTCTCTCTC CTGAGACCCC 420
GACACGCGCG CAGGATGTCC CTATCCTGCA CAAAGCAACA GGGGGTGGCC ACATTTCTGC 480
ACCCCACCAG AGGCCCCCCA CATCCAGATT CCTGGGGCAC TGGAGAGAGT AACTACAGCT 540
ACTTCATTCC CTCCCCCCCC CTCAGTGATG CTCCCATGTT GCCCCGCAGG GGACAGTAGG 600
CTCTGCGGGT GTCGCCTCGG GCATCTAACA ACAAGGATAG GGACGGGGGT GGGGAGGTGG 660
AAATCCCCGG GTGAGTCAAC CCATGCTCTA GAGGGGGGCG AGGTCCCAAC GCCGTGTAGC 720
CCGCGACAAC GCGGACTCCA CGCCACGCGT GCCTTCCTTC ACTCCTACGC CCCATCCCTG 780
AGCTAGGAAA AGGAGACACC TGGACTTTGC AGTTAATGTC CCTTTCCTTC GATACAAAGT 840
GATTCTTCCG AAAGAGAGAC TGAAAGAGAG GGGCAACTAA CTGGAAACTG AGGCAAAAAA 900
CTAGTCTCAC AGGCGGTGGG GCGACGGCCT TCGCCGGGGA CCCCGCCCAT GAACTCTGAA 960
AGCTTTCCCC GCTCGCTCGT CCGTAGCACC TTTCATCCTA GCCGGAGACA GAGAAGAAGG 1020
GATGCTGCAC CTCTCCCCAA CAACCTCACT GCCCCAAACC CTGCTTCCTG AGAACCCCCA 1080
TCCAGTCTTG CAAAGTCTCC AGCTCAAAGC GCTCGGATTC CGCCTTTCTC TTCAGCGCCA 1140
ACTTCCTGCC CGAAGGAAGG CGGGGAGCTC AGTCTGGGGG TGCGCCACTG AGTAGGTGGC 1200
GAGCTGCCTG GAGTAGTGGG CAGGGGCGCA TGGTAGATGA TCTGTTCCCT CGGTGCAGCA 1260
GAGCCTGGAG CAGCGCGTGC AACGCCTGTA CGAGCGCCTG ACCCCGGACC GGGCCCCCCA 1320
GCTGGGATCT CAGGGTCTCC GTGAACCGCG GCCGCCCAGA TCGGAACCTC CCCTCTGCCC 1380
CGCGCGCTCA 1390