EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM150-15391

Organism

Mus musculus

Tissue/cell

Thymus

Coordinate

chr8:125925790-125927040

Target genes

Number: 14
Name	Ensembl ID

Ankrd11	ENSMUSG00000035569
Dpep1	ENSMUSG00000019278
Cdk10	ENSMUSG00000033862
Spata2l	ENSMUSG00000033594
Zfp276	ENSMUSG00000001065
1300018I17Rik	ENSMUSG00000001062
Fanca	ENSMUSG00000032815
Spire2	ENSMUSG00000010154
Tcf25	ENSMUSG00000001472
Tubb3	ENSMUSG00000062380
Def8	ENSMUSG00000001482
Afg3l1	ENSMUSG00000031967
Dbndd1	ENSMUSG00000031970
Gas8	ENSMUSG00000040220

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Nr2f6	MA0677.1	chr8:125926656-125926670	GAGGTCACAGGTCA	+	6.51
RXRB	MA0855.1	chr8:125926656-125926670	GAGGTCACAGGTCA	+	6.18
RXRG	MA0856.1	chr8:125926656-125926670	GAGGTCACAGGTCA	+	6.04
Rxra	MA0512.2	chr8:125926656-125926670	GAGGTCACAGGTCA	+	6.26

Enhancer Sequence

TTAAAAAAAA AAGAAATTGT CCTAAGCAGG TAAGGAATAC TTTACAGAGA TTAAAGGGTA 60
TTTGATCTAG GGATGAGTGG GGAACCCTGA CCAAGAACCC GAGTCCAGTG GCAGGAACAA 120
AGACCATAGC CAGGCAAGGC CGGAGGTCTG TGTCTCATAA GCTGTTTGTG GAAAGCTCCA 180
GGCTGCTGAG GTGTTACAGC TGTGTCAGGT GTCTCCCAGG CAGCACTGAC GGTTTGCATC 240
CCACAAAGCC TAGCGGAGGC TCTAGTCTGT GGAGCAGAGT CTTAGCTGTG CAATGACAGC 300
GAGGGCCCCC TAAATCTTGG TCCATTGATG CCTTCCTGGG AGTCTACGTG TTTCAGACTG 360
GATGATTGGG TTTGGAGTAC ACATAAAACA CGCTTTAGGA CTGAGCCATT CTGATGTAAC 420
GGTACTGGCT GGCAGGCCCG ATGGCCTGAA TTCAGTCCCC AGGACTCATG TGCTGCACAG 480
TGAGAGCTCG CTCCTGTAGC TTGTCCTCTG ACCTCCACAC AATACACTGC CAGGTGCACA 540
CCTACAGAAT TACACCCAGG AAATGGAAAA GGGACAGTTT GGGGTTAAAG CACTGTGCAG 600
AGGCCCAGGC TGTGAACTTA AAGCACACAT GGAGGGTGAC TCACAACTAC CCATGATTCC 660
AGCTCCAGTG TACACTTAAG GAGGTCTCTT AATAGGTGCT CTGGGGCAAG GGGCCCTGGA 720
TGTGACTGAG CAGGGGCCCA GAGCACTGCC CCTTCAGCAG AATATTGAGG GCTGACTTGT 780
TTCCATCTAT CAGCCTAATG TCATAGCCCA TTCCTAAGGG GGCCATTTAC AGGAGGGACT 840
CCGTGTTCAA CGTACATGCC TGGTAAGAGG TCACAGGTCA CATGAATTGG TGCTGAATGT 900
CTTTTTTTCT CCAGCATGAA TTGGCAAGGC CATGAAGTCT GGATACAGGC TCTACAACTT 960
CTGCTCGTGG GTCAGCAGGG GCCTGGGAGG GCAGGCCTGA GGGGCCTGGG GAGGGCAGGC 1020
CTAAGGGCAT GGCTCCCACC AGTTGCCTCA CCTATCCCTG GGTTTGGTGG GATGATCTAC 1080
ACCCAGTCCT GGGGAGGGTT ACTGCTGAGA TGGGCCTCAT TCAATGTGAG TTTCCAAGTT 1140
GGAATGGCCT GTGGTGAGTT TCAGCCAAGG GGAGGAAGGA CTGCCTAGGA ATGGATGTAT 1200
GTTGTGGAAA TGACAAGCAA GCGCGGAAAA CCTGGCATCC TGCCTCTTCC 1250