EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM150-13896

Organism

Mus musculus

Tissue/cell

Thymus

Coordinate

chr7:29940370-29940690

Target genes

Number: 16
Name	Ensembl ID

Hnrnpl	ENSMUSG00000015165
Actn4	ENSMUSG00000054808
Eif3k	ENSMUSG00000053565
Map4k1	ENSMUSG00000037337
Ryr1	ENSMUSG00000030592
Rasgrp4	ENSMUSG00000030589
Fam98c	ENSMUSG00000030590
Spred3	ENSMUSG00000037239
Ggn	ENSMUSG00000031493
Psmd8	ENSMUSG00000030591
Kcnk6	ENSMUSG00000046410
Yif1b	ENSMUSG00000030588
2200002D01Rik	ENSMUSG00000030587
Spint2	ENSMUSG00000074227
Ppp1r14a	ENSMUSG00000037166
Dpf1	ENSMUSG00000030584

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Klf1	MA0493.1	chr7:29940597-29940608	GGCCACACCCA	+	6.62
SP1	MA0079.4	chr7:29940646-29940661	GAGGCCCCGCCCACC	+	6.53
SP3	MA0746.2	chr7:29940648-29940661	GGCCCCGCCCACC	+	6.14
SP4	MA0685.1	chr7:29940646-29940663	GAGGCCCCGCCCACCGC	+	6.05

Enhancer Sequence

GAAACCCTAA AAAGAGGAGT AGATCCCTAC CCAACCAGAA CCTTGGCCCT TCCCCCAGAG 60
TAAGCCTCAC CCACCGACAA TGGGGGATGT GGGTCCACTT CAGAACCACC CAACTGGCGT 120
TTAACTCAAC GCATTAAAGT TTTCAGAGGC CTCTGTCAGA ATTCAAGCCA AGCCTTAATT 180
AACCCTAGCC TATCTACCTG CGGCCTTCAA GCTCGCCGCA AAGCTTTGGC CACACCCACG 240
GGAGTCCAGT CTGAGCGTCA GAGCCCGCCC CATTCAGAGG CCCCGCCCAC CGCCACCACC 300
CTGGGCCTTC CAAGCTCGCT 320