EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM150-13879

Organism

Mus musculus

Tissue/cell

Thymus

Coordinate

chr7:29570450-29570680

Target genes

Number: 21
Name	Ensembl ID

Gmfg	ENSMUSG00000060791
Sycn	ENSMUSG00000084174
Nccrp1	ENSMUSG00000047586
Pak4	ENSMUSG00000030602
Fbxo27	ENSMUSG00000037463
Fbxo17	ENSMUSG00000030598
Mrps12	ENSMUSG00000045948
Sars2	ENSMUSG00000070699
Sirt2	ENSMUSG00000015149
Nfkbib	ENSMUSG00000030595
Rinl	ENSMUSG00000051735
Hnrnpl	ENSMUSG00000015165
Ech1	ENSMUSG00000053898
Lgals4	ENSMUSG00000053964
Lgals7	ENSMUSG00000053522
Capn12	ENSMUSG00000054083
Actn4	ENSMUSG00000054808
Eif3k	ENSMUSG00000053565
Map4k1	ENSMUSG00000037337
Rasgrp4	ENSMUSG00000030589
Psmd8	ENSMUSG00000030591

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF16	MA0741.1	chr7:29570565-29570576	GCCCCGCCCCC	+	6.02
KLF5	MA0599.1	chr7:29570565-29570575	GCCCCGCCCC	+	6.02
SP3	MA0746.2	chr7:29570564-29570577	TGCCCCGCCCCCC	+	6.01

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

mSE_01533	chr7:29565126-29611409	Th_Cells
mSE_12860	chr7:29569660-29570645	Thymus

Enhancer Sequence

AAAGCCTGGT GAGTCCTGGG CCCGGGGCTG GAGCTGGGAC CCCTTCCTCC ACGGCCTCAC 60
CCCCCAATCT GGCCACTCTG CCACCTGGCC CGTCCCCTAC TGTTCAGCAG AGGGTGCCCC 120
GCCCCCCAAG CCTCAGTTGG GCCCCTGACT CCTGACTGTT CTAGCTCTGT CTCCCATATC 180
TCCTGTCCTC TGTCCCTCTG TCCCTCTGTC CCTCTGTCTG TGTCTACCGC 230