EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM150-12457

Organism

Mus musculus

Tissue/cell

Thymus

Coordinate

chr5:124523100-124523600

Target genes

Number: 13
Name	Ensembl ID

Niacr1	ENSMUSG00000045502
Hip1r	ENSMUSG00000000915
Vps37b	ENSMUSG00000066278
Abcb9	ENSMUSG00000029408
Ogfod2	ENSMUSG00000023707
Arl6ip4	ENSMUSG00000029404
Pitpnm2	ENSMUSG00000029406
Mphosph9	ENSMUSG00000038126
2810006K23Rik	ENSMUSG00000047635
Cdk2ap1	ENSMUSG00000029394
Setd8	ENSMUSG00000049327
Snrnp35	ENSMUSG00000029402
Tmed2	ENSMUSG00000029390

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Foxd3	MA0041.1	chr5:124523300-124523312	GTTTGTTTGTTT	+	6.32
IRF1	MA0050.2	chr5:124523304-124523325	GTTTGTTTTCGCTTTTTTTTT	+	6.12

Enhancer Sequence

CTTTTTAAAA AGATGATTTT ACGTGTTGGT GCTTTGCCTG CATGTATGCC TGTGCACCAC 60
ATGCCTGGTG CCTTTAGAGG CCAGAAGTAC TGTCTTCCCT GGGACATGAG TCGCAGATAG 120
CTGGGGGCCA CCATGTGGGT GCTGGGATCG AACCATGGTC CTCTGGAAGA GCAGCAGTGC 180
CCCTAAGCCG TCCAGTCCAT GTTTGTTTGT TTTCGCTTTT TTTTTTTTTT TTTGAGACAG 240
GGTCTCACTG TGTAGCCCTG GCTGGCTTGG AACTCACTCT GTAGACCATG CTGGCCTCGA 300
ACTTGAAAAC GTATGTACCA TCATGCCTGG TGGTGTACAC GATCTTTACC AAGTGTTCAA 360
AACTGATGGA GGAGGAGGTT GTGCCCTGAG GCTACCTCAC AGCTGTTCCT GTGATGGGGC 420
TTTCATGTCA ATGGGAAGGA AATGGTATGA CAGGGCCTGG GTGCATCGCT CCAGTTCCTA 480
ACTCAGAGTC GCCTCCTGGT 500