EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM150-12412

Organism

Mus musculus

Tissue/cell

Thymus

Coordinate

chr5:122872780-122873670

Target genes

Number: 11
Name	Ensembl ID

Ccdc63	ENSMUSG00000043036
Ppp1cc	ENSMUSG00000004455
Hvcn1	ENSMUSG00000064267
Tctn1	ENSMUSG00000038593
Rad9b	ENSMUSG00000038569
Vps29	ENSMUSG00000029462
Gpn3	ENSMUSG00000029464
1500011H22Rik	ENSMUSG00000029463
Arpc3	ENSMUSG00000029465
Anapc7	ENSMUSG00000029466
Atp2a2	ENSMUSG00000029467

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

RARA

MA0729.1

chr5:122873105-122873123

CCTTGACCTTCTTACCCT

6.21

Enhancer Sequence

CGGCCTCGGT GGCCTCGGAG TTCTGGCTCC TTCCAGAACG ACGAAGTCCC CTGAGTCCCG 60
GGGACCCAGT CCACCGAGTG TCAGCCGTGG GGGTGCCACC CCAGCGGAGG GAGGGGACCC 120
CACTTTCCGA GACTGAGAGC ATCGGTGGCG GGCGCGGTGG CGCCTTTTTT TAATTTAAAA 180
GGAACCCTGG CAGTCTAATG TAAGGCCCGA CATTGCCGCC GGGGAGTGAC TGGTTTTGTG 240
TGGTTGTGTT TACAAACAGG GGTCTCCTGT AGCCCAGGCT AGCCTGCCCC AGGCTGTGTG 300
TGTGTGTGTG TGTAGTCAAG GAAGACCTTG ACCTTCTTAC CCTCCTGCCT ACGCCTCCCA 360
GAAGCTGGGG GGGGGGGGTT AACTGGTGTT TTACACCCCC ACCATGCTCT CAGTGTGCGT 420
GTGGACCTTG GGGATCGAAC CAGGGATTTC AGGCGTGCTA GGCAAAACAC TACCGATGGA 480
GTGACAGTTC TATCTAGCCG GGTTTACTGC GTCTCAAAGG AAGCCCGGGA CAGTTGTAGG 540
CTTGAATTGC CTGTAAGGGC CTTGCTTAAA AATTTCCCCA TCATTGCTCA CTCTTCGACG 600
TGGCTCCGCA AGTCAACCTA GTCATTCCTT TTCTCTAATT TCTCCTCCTG CCCGAGCGCT 660
CTCAGAGCAA GCATTGGCAC CGGTGGCTTC ACTTTAGAAC CGCTGCCTGA GCCGGGCAGT 720
GGTGGCGCAT GCCTTTAGTC CCAGCACTTG GGAGGCAGAG GCAGGCGGAT TTCTGAGTTC 780
GAGGCCAGCC TGGTGTACAG AGTGAGTTCC AGGACAGCCA GGGCTACACA GAGAAACCTT 840
GTCTCAAAAC AAAACAAAAC AAAAAAAAAT GCTAAGGAAA TGTGTTTATT 890