EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM150-12389

Organism

Mus musculus

Tissue/cell

Thymus

Coordinate

chr5:122023610-122025060

Target genes

Number: 10
Name	Ensembl ID

Trafd1	ENSMUSG00000042726
Naa25	ENSMUSG00000042719
Erp29	ENSMUSG00000029616
Adam1b	ENSMUSG00000062438
Mapkapk5	ENSMUSG00000029454
Aldh2	ENSMUSG00000029455
Acad12	ENSMUSG00000042647
Acad10	ENSMUSG00000029456
Brap	ENSMUSG00000029458
Fam109a	ENSMUSG00000044134

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

EWSR1-FLI1	MA0149.1	chr5:122024551-122024569	TCATCCATCCCTCCTTCC	-	6.17
Nr5a2	MA0505.1	chr5:122024611-122024626	GCTAGCCTTGAACTT	-	6.14
RREB1	MA0073.1	chr5:122024050-122024070	GGGGTCGGGGTGGGGTGGGG	-	6.68

Enhancer Sequence

GTCCCAAGAG ACCCAAGAAT TCACCTTCCA CTGCCGCCAC TGAGCTCATG ACAAGAACCC 60
AGATCTGTGC CAGGTGCTGG GACTCAGACT CAGCCCTCCT GACGCCCTTA GAGGCCGGAA 120
TGGCTTGAGG ATGAGGGGGC TGAGGCTAGG AGTAGCCAAG TCGCATAGCC AGTTACCCCG 180
ATAGCCAATG AGGAGGCAGG ACCCAATCAA ACTATTGTGT GGCCTCCTTC CTGGCTCAGT 240
GCTGTCCTGT CTGTGAGGCA GGCACAGGTT ACTACTCTTC CCCAGAGCCT GGCACAAAGG 300
TGACCCCACA TGCGCCTCTG TGACACTCAT CAAAGCTTCT GACTGAAGGC TGGGTGTGGA 360
AGGGGCCGGG AGGTAAAGCT GTCTGGAAAC CACTGTTGTC ACACTAACTA GTGTCCCCTC 420
TCAGAAGGCT GAGATGTCAG GGGGTCGGGG TGGGGTGGGG ACCTGCTCAC CTCTGGCATG 480
TGAAATGTGT CCCTGCTTCC AAGGACAGCT TGTTTAGGGA CTCTCTAAGT CTCTACCACA 540
GAGCAGCCCC ATAACCACCC TGCTCCTCTC ATCTAGGCTT CACACAGGCA CTGCTTCTGA 600
AGCAGCCACA GCTCAGCATG CCGTGGCCGG TGCCCGTGCA CGGACTTGGT TCTCACCGTC 660
CAAGATGGAG AGGCTCAACG AGGTGGGCTC ACCCAAGTGT CACGGTTCGA CGTGCAATGA 720
CCCCGCTGGC TTTCATGTTT GAATATCTAG TTCACCCAGC TGGTGGCAGT GTTTTGGAAC 780
ATTGTGGAAC CTTTCGAATT GTTGTCCAGG TGGAGGAAGT GGGTCCTTTG TAGGAGGTTA 840
CAGCTGAGCC CCACTTCCTG TCTTGTTGAC CTGGTCCGCA CAGCCGTGAG CAAGCACCCA 900
CAAACTGCTG TCCTGCCTCA TCCCCATAAG TCACTGAGCT GTCATCCATC CCTCCTTCCT 960
TTAACCTGCT TTGAGACAGG GTCTCACTAT GTGTAGACAG CGCTAGCCTT GAACTTACAG 1020
AGATCCGCCT GCCAGCACGC CTGGCTTGTT TTCTGTTTTG AGGCACTGTC TTGTGTAGCT 1080
GAGGCTGGCC TCAAACTTAC TAAGTAAGTA GCTCACTTTC TCTGAGCTCC TGATCCTCCT 1140
ACCTGCACCT CCCTATGCTG GGGTTAAAGG CAACATCCTG GTCTCAAAGG GAATAAAAAG 1200
AGCCTCTGGG CATCCGGTGG GTCCCCCAGG GGCACAACAG CATGGCCTGG ACTTCACCTA 1260
GGCTTTCTGA AGCCGGAGAG TCCCAGCCCC CTGGGGTAAG TGCTGACACC ATCCCCGTCC 1320
CCACCTGGAA GCTGCATCCA GGGAGGCTGG CAGACCACAG AGAACATAGT CCTGAGCTGC 1380
CTTCTGGCAC ACATATGAGA GCTGTCATTT AGGGACCCAG AGGCATGAAG GGAACAGGCC 1440
CTGAGCCTGA 1450