EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM150-11683

Organism

Mus musculus

Tissue/cell

Thymus

Coordinate

chr4:149030800-149031350

Target genes

Number: 9
Name	Ensembl ID

Ube4b	ENSMUSG00000028960
Rbp7	ENSMUSG00000028996
Nmnat1	ENSMUSG00000028992
Lzic	ENSMUSG00000028990
Ctnnbip1	ENSMUSG00000028988
Clstn1	ENSMUSG00000039953
Pik3cd	ENSMUSG00000039936
Tmem201	ENSMUSG00000044700
Slc25a33	ENSMUSG00000028982

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Nkx2-5(var.2)

MA0503.1

chr4:149031084-149031095

AGCCACTCAAG

6.62

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_12350

chr4:149030383-149033612

Spleen

Enhancer Sequence

GGGGCAGTCC TGGGGAAGGA CACCAGCGGG TTAGGGCCAG GCACAAAAGC CCCATTTGCT 60
GACCTCGGAG GGAAGGCCAA TTGGGGAGGG GATCTGGGCT TCAAGGGTAG ACTCCCAGAT 120
AGACTCAAGG GAAGACCCTG TTTGAGAAGA GGGAGGACCA ACTGCCTTGC CCTAGTGACA 180
AAACGAGCCC AGGCTGCATC TCGGCTCCTG GCTCACACCC AGTATGCATC AGCAGAGTGA 240
GAGTGAGAGC CACTTTAAAT ACTGGAATTG GTGACTAGGG GCCCAGCCAC TCAAGACAGC 300
CGCTGGCCCA GGCCCTTTAG TCCCTCTGAG GATACTTTCT ACCCAGGGAG CTGCCTACAA 360
AAGCCTACTG GCCTACAGGT CTAGAGCAGA TAGCCCAAGC AGGCCGTTCA CAGGCTATCC 420
CTAGAGTGAG TAGGGATCCA AGATGGTGGA GAAGCTTGGG GTTTAGGGTC CCCCAGGACC 480
CCTGTCCTCA ACCTGCCCGC CTGCCTGTGG CTTGGGGCAC TGAAGGGAGG CCCTCCCAGC 540
CAGCCAATAC 550