EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM150-11557

Organism

Mus musculus

Tissue/cell

Thymus

Coordinate

chr4:135667910-135669200

Target genes

Number: 13
Name	Ensembl ID

Srsf10	ENSMUSG00000028676
Pnrc2	ENSMUSG00000028675
Cnr2	ENSMUSG00000062585
Hmgcl	ENSMUSG00000028672
Gale	ENSMUSG00000028671
Lypla2	ENSMUSG00000028670
1110049F12Rik	ENSMUSG00000028669
Tceb3	ENSMUSG00000028668
Rpl11	ENSMUSG00000059291
Id3	ENSMUSG00000007872
E2f2	ENSMUSG00000018983
Asap3	ENSMUSG00000036995
Hnrnpr	ENSMUSG00000066037

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

NEUROD2	MA0668.1	chr4:135669091-135669101	ACCATATGGC	-	6.02
NEUROG2	MA0669.1	chr4:135668898-135668908	GACATATGTT	-	6.02
TCF4	MA0830.1	chr4:135668489-135668499	CGCACCTGCT	+	6.02

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_01456

chr4:135608765-135679794

Th_Cells

Enhancer Sequence

TCTCTCTGTA TAGCTCTGGT TGTTTCTGGA ACTCGTTCTG AAGACGAGGC TGGTCTCAAA 60
CTCACAGAAA TCCGCCTGCC TCTGCCTCCT GAGTGCTGGG ATTAAAGGAG TGCGCCACCA 120
CCCAGCTGTC AGGCTGTCAT TTTCTGTCTT AATTGTAAAC TAACAGGTAA ATGCACCCAT 180
TGTAGAGAAG GAAAACTGAG GTCCATAGGA TGGATGTCCA TCTATAGTAT CAGAGTGAGG 240
GCTAGCATGG AAGAAGCATG GTCAAGTTAC AAGGTCCATC CCTCTCTCTT CCTAGGGACT 300
CGGTGTCCCC AGGCTTGGAA GATGGAGAGT CCTTGCTTAG GAGGGAAGGT ATGGACATTA 360
TTATTCAAAA GCACTGGGCA AGAGGGACAG GTGGCGTGGC TCCAGAGCTG CAAGCAGGTG 420
TGAGGTGGGC CTGAGGCGTG GAGGAGCTGA GTGAGGTCAT CCAATCCCTG CCTCCTCCAG 480
GCCTGAGTGC CTCTGTCTGA GGGCCGCTCT GCCAGAGCTG AGCTCTGGGC TCTGGGTTGT 540
GGACCTTGCA GCTGTGACGT CAGAGCCCTT CCTTCCCTCC GCACCTGCTA GAAAAGCCAC 600
CCATTTTAAA CTCTTTCTCA CCCTACCCTG CCCTTCCCCC ACAGAGGCCA CAAGTGCTTC 660
TAACACCAAT TACCAGCTCA CTTCACTAGC CCAACAGCTT CTTCTTCTGT TGACCCCCAT 720
GTCTGCCTCA CCATTCATTC TCCCCAAGGC TGCAGGAACC CCCACTCCTA GCCCCTACCC 780
CTCCACATCC CCCTCCCTAA TTTAATACAC ACTCCAGAGC AGATTCCAGG CTTCCTGGAG 840
CTTGTCGTTC TTCAATGGCG GGCTCTGCCC TGTAAAACCA GAAGCTCTGG AGCTAAGGCA 900
ATGGAGCCGA TGTGACTCGG TTACCAAGTG CTTGTCTCAG AAACATGAGG ACCAGGGTTC 960
GAATTTCTAG CACATGGGTA AAAAGCTAGA CATATGTTTC CAGCATGGGG GTGGGAGAGA 1020
TGGAGACATG CTCATCCCAG AGGCCAGTCT GGCCTTAGCA CTTAGCATCG CATTTAGCGA 1080
GAGACCCTGT CTTAAGAAAT AGAGTGGAGG GGCTGGAGAG ATGGCCCAGT GGTTGAGAGC 1140
ACCAGCTGCT CTTCCAGAGG ACCTGCGTCC AACCCCCAAC AACCATATGG CAGCTATCAA 1200
CCTTAAGTAA CTCAAATTTT AGTGTACCTG ACTCCCCCTT CTAGCCTCCA TGGGCACAGT 1260
ACACATGTGA CACACAGACA CATAGGCATG 1290