EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM150-11487

Organism

Mus musculus

Tissue/cell

Thymus

Coordinate

chr4:133393420-133393940

Target genes

Number: 12
Name	Ensembl ID

Gpatch3	ENSMUSG00000028850
Sfn	ENSMUSG00000047281
Zdhhc18	ENSMUSG00000037553
Pigv	ENSMUSG00000043257
Arid1a	ENSMUSG00000007880
Rps6ka1	ENSMUSG00000003644
Hmgn2	ENSMUSG00000003038
Aim1l	ENSMUSG00000012123
Cd52	ENSMUSG00000000682
Ubxn11	ENSMUSG00000012126
Sh3bgrl3	ENSMUSG00000028843
Ccdc21	ENSMUSG00000037443

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Foxd3	MA0041.1	chr4:133393925-133393937	GTATGTTTGTTT	+	6.37
IRF1	MA0050.2	chr4:133393846-133393867	ATTTTCTTTCTTTTTCGTTTT	+	6.91

Enhancer Sequence

TAGAAATAGT GAGTTTGTGA GAAAGGCTCA CTAATGTTCA TCACCAGGAA ATGAATACTA 60
AACTCACAAA GAGAAACCAC TCCACACCCA CCAGTGTGAC TATATTTAAA ACAACTGATA 120
CCACAGTCTA AGCCCAGGTG TCCAACCTTG TGACACTTCA ACCTGGTTTT GTCATCTACA 180
CGTGTGTTGG GCCTCGTTCA TAGACTGCCT TGGACCCCTG TAGCCAGTTA GAGACACTGG 240
AAGATCATGC ATTCCTGGTA GGAAAGGAAA GTGGTCACTT TGGAAAACAT TATATACATG 300
AATTTCTCTG TGTAGCCCTG GCTGCCCTGG GAACTCACTC TGTAGACCAG GCTGGTCTTG 360
AACTCAGAGA TCCACCTGCC TCTGCCTCTG GAGTGCTGGG ATTAAAGGTA TACGGCACCT 420
TGCCTGATTT TCTTTCTTTT TCGTTTTTTT TTTTTTTTCA AGACAGAGTT TTGCTCTGTA 480
GCACAGGATG GCCTCAAAAA ATGCAGTATG TTTGTTTGTT 520